Ss1.1-rdbla0134_o7.5
|
CCTTGAGACTATCGACCAGTGGTTTGACTCCCGGAGCAATGACTCGAGCTGTCAGGTGCT
AACTGACAGTGAAGGTGCTGAGGACCCGGCCAAGCCTGCCGAGCACAAGCCCTCCAGCAA
GACGCGAAGAGCAGACCTGAATCCAGAGAAGCATATTAGCCATAAAGCTGCCCTCGAATG
GACCGAGAATTTACTGGATTATCTAGAACAACAAGATGACATGCTTCTGTCGGATAAACT
GGTCCTGCGGAGGCTTCGAACCATAATAAGAAGGAAACAGAAGATCCAGAATAACAAGAG
TCGTTGACAGTGCGCGGAAGGGTTTCCGTGCGTTTGCGTCTTTGTGACTTTATCTGCAGT
GGAACTTATTTTCTTGTTTGAAGTGCTGTGGATTTCCAGGCCAAATGCATTTTATAAATG
ATTTTAGGATTAGATGCCGTTTTGGATTTACTTAAATGACTGCGCTTTGGTGTCGATTCT
AGGACGTGAGCATTGACATGTGCTTTGTTTAGCTCCTGTCTCTAATCTGTGTTATACTAA
TTCGACCGTAAGGTCCCTGAGGCCACGGATCTCGTGACTGTTTCGTGCCTGAATTTCATT
GTCTATTAGAGGACCGTGCACTCTCTAGGCAATCAATAAATCTTACTTCAATCCTTAAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCTTGAGACTATCGACCAGTGGTTTGACTCCCGGAGCAATGACTCGAGCTGTCAGGTGCT
AACTGACAGTGAAGGTGCTGAGGACCCGGCCAAGCCTGCCGAGCACAAGCCCTCCAGCAA
GACGCGAAGAGCAGACCTGAATCCAGAGAAGCATATTAGCCATAAAGCTGCCCTCGAATG
GACCGAGAATTTACTGGATTATCTAGAACAACAAGATGACATGCTTCTGTCGGATAAACT
GGTCCTGCGGAGGCTTCGAACCATAATAAGAAGGAAACAGAAGATCCAGAATAACAAGAG
TCGTTGACAGTGCGCGGAAGGGTTTCCGTGCGTTTGCGTCTTTGTGACTTTATCTGCAGT
GGAACTTATTTTCTTGTTTGAAGTGCTGTGGATTTCCAGGCCAAATGCATTTTATAAATG
ATTTTAGGATTAGATGCCGTTTTGGATTTACTTAAATGACTGCGCTTTGGTGTCGATTCT
AGGACGTGAGCATTGACATGTGCTTTGTTTAGCTCCTGTCTCTAATCTGTGTTATACTAA
TTCGACCGTAAGGTCCCTGAGGCCACGGATCTCGTGACTGTTTCGTGCCTGAATTTCATT
GTCTATTAGAGGACCGTGCACTCTCTAGGCAATCAATAAATCTTACTTCAATCCTTAAAA
AAAAAAAAAAAA
|
|
gi|61873336|ref|XP_610945.1| |
Protein identifier
|
gi|61873336|ref|XP_610945.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-652, gnl|bosTau2|chr6 (15732594-15731949) |
|
1-652, gnl|Hg17|chr4 (90392575-90393208) |
|
1-652, gnl|Mm7|chr6 (59179944-59180552) |
| |
|
133-285, gnl|bosTau2|chr11 (28035110-28035262) |
|
133-285, gnl|canFam2|chr21 (7783387-7782516) |
|
133-285, gnl|dasNov1|scaffold_90389 (4132-5009) |
|
133-285, gnl|echTel1|scaffold_311873 (8291-7420) |
|
133-285, gnl|hg17|chr11 (95764094-95764965) |
|
133-285, gnl|Hg17|chr11 (95764865-95765017) |
|
133-285, gnl|mm7|chrUn_random (11374195-11373327) |
|
133-285, gnl|Mm7|chrUn_random (11373425-11373273) |
|
133-285, gnl|monDom2|scaffold_15 (671608-670737) |
|
133-285, gnl|oryCun1|scaffold_150505 (8953-8082) |
|
133-285, gnl|panTro1|chr9 (97695514-97696385) |
|
133-285, gnl|rheMac2|chr14 (94938979-94939850) |
|
133-285, gnl|rn3|chr8 (10117024-10116153) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-652, gnl|bosTau2|chr6 (15732594-15731949) |
|
1-652, gnl|Hg17|chr4 (90392575-90393208) |
|
1-652, gnl|Mm7|chr6 (59179944-59180552) |
| |
|
133-285, gnl|bosTau2|chr11 (28035110-28035262) |
|
133-285, gnl|canFam2|chr21 (7783387-7782516) |
|
133-285, gnl|dasNov1|scaffold_90389 (4132-5009) |
|
133-285, gnl|echTel1|scaffold_311873 (8291-7420) |
|
133-285, gnl|hg17|chr11 (95764094-95764965) |
|
133-285, gnl|Hg17|chr11 (95764865-95765017) |
|
133-285, gnl|mm7|chrUn_random (11374195-11373327) |
|
133-285, gnl|Mm7|chrUn_random (11373425-11373273) |
|
133-285, gnl|monDom2|scaffold_15 (671608-670737) |
|
133-285, gnl|oryCun1|scaffold_150505 (8953-8082) |
|
133-285, gnl|panTro1|chr9 (97695514-97696385) |
|
133-285, gnl|rheMac2|chr14 (94938979-94939850) |
|
133-285, gnl|rn3|chr8 (10117024-10116153) |
|
mas (0.210305) |
|
hea (0.204499) |
|
duo (0.172801) |
|
csp (0.161186) |
|
bfe (0.149858) |
|
ssp (0.13552) |
|
ova (0.129132) |
|
sug (0.127291) |
|
thg (0.126791) |
|
bla (0.124347) |
|
ecc (0.115035) |
|
mas (0.210305) |
|
hea (0.204499) |
|
duo (0.172801) |
|
csp (0.161186) |
|
bfe (0.149858) |
|
ssp (0.13552) |
|
ova (0.129132) |
|
sug (0.127291) |
|
thg (0.126791) |
|
bla (0.124347) |
|
ecc (0.115035) |
