Non-Coding RNA Search

Ss1.1-rdbla0134_o8.5

Sequence:


               
               GAGTTCCTGGACCTGCTTGACGTCCTGCTTCCCCACGCCCAGACATATGTCCCCCGGCTG
GTAAGGATGGAGGCGTTCCACCTCAGCCTGTCCCAGAGTGTGGTTCTGCGCCACCACTGG
ATCCTCCCCTTCGTGCAGGTGCTGAAGGACCGCGTG------------------------
------------------------------------------------------------
------------------------------------GGCTACGAGAGCATGAAATTGCAG
GAACAGGAAACAAAAATTTGGCCAGTGGTTCCCTAGGGTAGTGGTAAACAGTACCACTCC
CATCTCTACCCCTTGATTCCTGGCTGGGGGAGAAGCAGCACCATACGTGGATGCTGACTC
AATACATATACAGATCTTCTGGGTTCTGTTCCAGAATAAAATAAAATAAAGTGAGTCACA
CAGAGCTTCTGGTTTCCCAATGCATTAAAAAAGTTATATTCTTACTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTTCCTGGACCTGCTTGACGTCCTGCTTCCCCACGCCCAGACATATGTCCCCCGGCTG
GTAAGGATGGAGGCGTTCCACCTCAGCCTGTCCCAGAGTGTGGTTCTGCGCCACCACTGG
ATCCTCCCCTTCGTGCAGGTGCTGAAGGACCGCGTG------------------------
------------------------------------------------------------
------------------------------------GGCTACGAGAGCATGAAATTGCAG
GAACAGGAAACAAAAATTTGGCCAGTGGTTCCCTAGGGTAGTGGTAAACAGTACCACTCC
CATCTCTACCCCTTGATTCCTGGCTGGGGGAGAAGCAGCACCATACGTGGATGCTGACTC
AATACATATACAGATCTTCTGGGTTCTGTTCCAGAATAAAATAAAATAAAGTGAGTCACA
CAGAGCTTCTGGTTTCCCAATGCATTAAAAAAGTTATATTCTTACTGT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-160, gnl|bosTau2|chr18 (22851759-22851918)
               

               
               1-160, gnl|Hg17|chr16 (56601348-56601507)
               

               
               1-160, gnl|Mm7|chr8 (93928002-93928161)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-160, gnl|bosTau2|chr18 (22851759-22851918)
               

               
               1-160, gnl|Hg17|chr16 (56601348-56601507)
               

               
               1-160, gnl|Mm7|chr8 (93928002-93928161)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nms (0.213858)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.213858)
               

               
               bla (0.124347)

	1-160, gnl\|bosTau2\|chr18 (22851759-22851918)
	1-160, gnl\|Hg17\|chr16 (56601348-56601507)
	1-160, gnl\|Mm7\|chr8 (93928002-93928161)