Non-Coding RNA Search

Ss1.1-rdbla0136_p7.5

Sequence:


               
               AAGGCAAGAAGAAAAAAAAAAAAAAAATCCACCTCCCAGCCTGAGGCACTCAGCGAGCTC
TCCATCACAACCAGTCAGGGAGAAGAGCAGGACGCAGGGCAGACCTGTCACCAAAGACGA
CTAAGTTCAAGGGCTGTCAGCTTCCCCAGTGGCTTCGGTCTACCCAGCCACTGGCCAGTC
TGTGGGGTAGAGAAGCCTTGCTCTTATCACTCCTCAGTGTTCTTTCACCTCAAGGCCTTT
GGCTTTAGTGAATCAAAAGCTGATAATAGACTTTTCTTTCCCTCTGCTTTTGGCTCTGTT
CTGTCTGCCTTGAGACATGAACATGGGCCAGTTAACAGCTGCCTCAACTGTCCTTTTCTG
TTTCAGTTTGTCAATGCTGAGAAGAGTGAGTTTTCAGAGGATAAAATGTTGTACTGGGGG
TAGCCATAAATATCAGGTATATTTTAGTATGTTCTTGTAAATATTCTCCTGTCACACAAA
GGTGGTGGGTTGTAAAGGTAAGGCAGAAACTGTTTCCAGGAGGTCCCGTCGTGGGGCAGT
GGAAACAAATCTGAGCAGTATCCATGAGGACACGAGTTCGATCCCTGGCCTCGCTCAGTG
GGTTAAGGATCCATTATTGCCATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGGCAAGAAGAAAAAAAAAAAAAAAATCCACCTCCCAGCCTGAGGCACTCAGCGAGCTC
TCCATCACAACCAGTCAGGGAGAAGAGCAGGACGCAGGGCAGACCTGTCACCAAAGACGA
CTAAGTTCAAGGGCTGTCAGCTTCCCCAGTGGCTTCGGTCTACCCAGCCACTGGCCAGTC
TGTGGGGTAGAGAAGCCTTGCTCTTATCACTCCTCAGTGTTCTTTCACCTCAAGGCCTTT
GGCTTTAGTGAATCAAAAGCTGATAATAGACTTTTCTTTCCCTCTGCTTTTGGCTCTGTT
CTGTCTGCCTTGAGACATGAACATGGGCCAGTTAACAGCTGCCTCAACTGTCCTTTTCTG
TTTCAGTTTGTCAATGCTGAGAAGAGTGAGTTTTCAGAGGATAAAATGTTGTACTGGGGG
TAGCCATAAATATCAGGTATATTTTAGTATGTTCTTGTAAATATTCTCCTGTCACACAAA
GGTGGTGGGTTGTAAAGGTAAGGCAGAAACTGTTTCCAGGAGGTCCCGTCGTGGGGCAGT
GGAAACAAATCTGAGCAGTATCCATGAGGACACGAGTTCGATCCCTGGCCTCGCTCAGTG
GGTTAAGGATCCATTATTGCCATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               213-511, gnl|bosTau2|chr13 (32829886-32830183)
               

               
               213-511, gnl|Hg17|chr20 (6004741-6004421)
               

               
               213-511, gnl|Mm7|chr2 (132646346-132646070)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               213-511, gnl|bosTau2|chr13 (32829886-32830183)
               

               
               213-511, gnl|Hg17|chr20 (6004741-6004421)
               

               
               213-511, gnl|Mm7|chr2 (132646346-132646070)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               nep (0.183925)
               

               
               duo (0.172801)
               

               
               bla (0.124347)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.183925)
               

               
               duo (0.172801)
               

               
               bla (0.124347)

	213-511, gnl\|bosTau2\|chr13 (32829886-32830183)
	213-511, gnl\|Hg17\|chr20 (6004741-6004421)
	213-511, gnl\|Mm7\|chr2 (132646346-132646070)