Non-Coding RNA Search

Ss1.1-rdbla0138_g3.5

Sequence:


               
               AGCTTAATTCCCCCTCCTTTCAAGTAATTATTCTCAGCTGCAAGAGAATTATATTTGGGG
AATCATAAAATAAAATTAATAAAATTAGATCCTGACAAATGAGCAATCACTAGGATATAA
AAATATTCTCTCTTAATATCCATAGTTTAAATTTCAGGTAAAAAATAAAACCACAAAATA
GAAAATGATAATAATAAAATCCAACATATAAAAACCTGAGAAATATGACCAAGGTGGTCC
TTAGCGGAAAATGAGTACAGTTGCATTACTAAAAATCAAATAAATTAGGCAATCAACTCT
GTAAGTTAGACAAAATAAAGTTAGCTAAAAGAAAAAAAATGGAAACAAGTTAATGAATTA
GAAGACAGAGAATAATAAATGTGATAAATGCAAGAAATGGATATTTTAAAATATAAAGAC
GAAAAATGTTAGATGGTTGACAGGCTTATTCAAGAAAAATAAAGCCCAGAGAGCTCCCTA
ATGGCCTAGCAGTTAAGGATCCAACATTGTCACTGCTGTGCCTCGAGTTTAGTCCCTGGC
------------------------CACAGTCCAAAAAAAAAAAAAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCTTAATTCCCCCTCCTTTCAAGTAATTATTCTCAGCTGCAAGAGAATTATATTTGGGG
AATCATAAAATAAAATTAATAAAATTAGATCCTGACAAATGAGCAATCACTAGGATATAA
AAATATTCTCTCTTAATATCCATAGTTTAAATTTCAGGTAAAAAATAAAACCACAAAATA
GAAAATGATAATAATAAAATCCAACATATAAAAACCTGAGAAATATGACCAAGGTGGTCC
TTAGCGGAAAATGAGTACAGTTGCATTACTAAAAATCAAATAAATTAGGCAATCAACTCT
GTAAGTTAGACAAAATAAAGTTAGCTAAAAGAAAAAAAATGGAAACAAGTTAATGAATTA
GAAGACAGAGAATAATAAATGTGATAAATGCAAGAAATGGATATTTTAAAATATAAAGAC
GAAAAATGTTAGATGGTTGACAGGCTTATTCAAGAAAAATAAAGCCCAGAGAGCTCCCTA
ATGGCCTAGCAGTTAAGGATCCAACATTGTCACTGCTGTGCCTCGAGTTTAGTCCCTGGC
------------------------CACAGTCCAAAAAAAAAAAAAGAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               7-473, gnl|bosTau2|chr9 (37938467-37938943)
               

               
               7-473, gnl|Hg17|chr6 (129806448-129806925)
               

               
               7-473, gnl|Mm7|chr10 (26804821-26804388)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-473, gnl|bosTau2|chr9 (37938467-37938943)
               

               
               7-473, gnl|Hg17|chr6 (129806448-129806925)
               

               
               7-473, gnl|Mm7|chr10 (26804821-26804388)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ese (0.126502)
               

               
               bla (0.124347)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ese (0.126502)
               

               
               bla (0.124347)

	7-473, gnl\|bosTau2\|chr9 (37938467-37938943)
	7-473, gnl\|Hg17\|chr6 (129806448-129806925)
	7-473, gnl\|Mm7\|chr10 (26804821-26804388)