Non-Coding RNA Search

Ss1.1-rdbla0140_d17.5

Sequence:


               
               CGCATCCTCGACCCAGAGAAGAGGCTGTGCACGGGAACTCGGAACGGAGAAGGGCCGTGG
CAGCTGCCCCTCCCGCTCTGTCCCCTCTCCCTCTGACCCACGCTTCGGCGGAATCATGGC
TGAGTATGGCTTTGAAAAGGTGTCTTTTCTCCACTGGTGCCAAAAGTTCAGTTGCAGCTT
TCACAACCATTCGATGCGGTTTGGGGAATCGGTTTTGTTGTTGTTTGGTTTCCCCAACAG
AAAAGAGCAGCCATGAGCAGGCTTCCGTTCTGGATGTCTCTCGTCCACTGTGCGGAACGT
GCTAGTTTTACTTCATGTTGGCTCCTATGAGCCTTTGCCCGTCTCCAGTATTTCCCCCAG
AACTTTTTCAGGAAACGGAGGTCATGTGACTGATACCTGCGTAGTGACTCCAGGCTGCTT
ATTTTATGGGACAGAGGTAGTAACTTATTTTAAAGATAAAGCGATCAAGTGGGGAAATTT
ATAAAGATAAATATTATATATTTTATTTTTCATACATGGTGGAAGTGCAAATCTGTGGGA
ATCCCATGTGTAGGACCAAGCTGACATGCCCATCGTAACACGTGTGCTACCAGAGCTCTT
CTGATGATGGAGTTTGGATTAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCATCCTCGACCCAGAGAAGAGGCTGTGCACGGGAACTCGGAACGGAGAAGGGCCGTGG
CAGCTGCCCCTCCCGCTCTGTCCCCTCTCCCTCTGACCCACGCTTCGGCGGAATCATGGC
TGAGTATGGCTTTGAAAAGGTGTCTTTTCTCCACTGGTGCCAAAAGTTCAGTTGCAGCTT
TCACAACCATTCGATGCGGTTTGGGGAATCGGTTTTGTTGTTGTTTGGTTTCCCCAACAG
AAAAGAGCAGCCATGAGCAGGCTTCCGTTCTGGATGTCTCTCGTCCACTGTGCGGAACGT
GCTAGTTTTACTTCATGTTGGCTCCTATGAGCCTTTGCCCGTCTCCAGTATTTCCCCCAG
AACTTTTTCAGGAAACGGAGGTCATGTGACTGATACCTGCGTAGTGACTCCAGGCTGCTT
ATTTTATGGGACAGAGGTAGTAACTTATTTTAAAGATAAAGCGATCAAGTGGGGAAATTT
ATAAAGATAAATATTATATATTTTATTTTTCATACATGGTGGAAGTGCAAATCTGTGGGA
ATCCCATGTGTAGGACCAAGCTGACATGCCCATCGTAACACGTGTGCTACCAGAGCTCTT
CTGATGATGGAGTTTGGATTAAAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-623, gnl|bosTau2|chr25 (35908722-35908104)
               

               
               1-623, gnl|Hg17|chr7 (97903188-97903817)
               

               
               1-623, gnl|Mm7|chr5 (143585074-143585611)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-623, gnl|bosTau2|chr25 (35908722-35908104)
               

               
               1-623, gnl|Hg17|chr7 (97903188-97903817)
               

               
               1-623, gnl|Mm7|chr5 (143585074-143585611)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               bla (0.373042)
               

               
               ova (0.129132)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.373042)
               

               
               ova (0.129132)
               

               
               ese (0.126502)

	1-623, gnl\|bosTau2\|chr25 (35908722-35908104)
	1-623, gnl\|Hg17\|chr7 (97903188-97903817)
	1-623, gnl\|Mm7\|chr5 (143585074-143585611)