Ss1.1-rduo412b_i6.5
|
CTCGTGTGTGTCCAGAAGAGCTACCGCCGGAAGCTTCGGGCTATGAAGGCTGCCAAGGAG
GCCCAGAAGACAGCAGTAGGGGTGATGCCCCCAGTCTCTGCCATCCCCGGGACTAACGTG
TACAACACAGAGCGGGCCAATCCCATGCTGAACCTCCCCACCAAGGACCTGGGCTTTGAG
TCCCAATCCTCCTCCAGTGACTTGGACCACATCAGCCTCAACTCCCTGGATGACAACTCT
GTGGATCTGGCAAATAGCAAGCAGGAAATCAAGAAGGAAGCTCTGTGCAGTCTGAAGGAG
CAGGATCCTGAGCCTCTGAGCAGAGTGCTGTCGGCAAGGAAGGTGGGCCCGCGTGAACAG
AAGGAGGGGCTGGCCTTTGACAACAAGGGCCTGAATACCACAGACCTGTGATGGAGATCC
TGCCCCAGGACCCTGGTCACTGAGCCCCACACCTGGCTCCCACTCTCCTGGTCGACCTCG
GAAGAGGCCCCATCACCCCTAAATTATACCTACCCTTTCCTGATTGTAATAAGAGCTGGT
GGTGCCCCACCCCTGTCTGCTTATAGCCAATCACAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTCGTGTGTGTCCAGAAGAGCTACCGCCGGAAGCTTCGGGCTATGAAGGCTGCCAAGGAG
GCCCAGAAGACAGCAGTAGGGGTGATGCCCCCAGTCTCTGCCATCCCCGGGACTAACGTG
TACAACACAGAGCGGGCCAATCCCATGCTGAACCTCCCCACCAAGGACCTGGGCTTTGAG
TCCCAATCCTCCTCCAGTGACTTGGACCACATCAGCCTCAACTCCCTGGATGACAACTCT
GTGGATCTGGCAAATAGCAAGCAGGAAATCAAGAAGGAAGCTCTGTGCAGTCTGAAGGAG
CAGGATCCTGAGCCTCTGAGCAGAGTGCTGTCGGCAAGGAAGGTGGGCCCGCGTGAACAG
AAGGAGGGGCTGGCCTTTGACAACAAGGGCCTGAATACCACAGACCTGTGATGGAGATCC
TGCCCCAGGACCCTGGTCACTGAGCCCCACACCTGGCTCCCACTCTCCTGGTCGACCTCG
GAAGAGGCCCCATCACCCCTAAATTATACCTACCCTTTCCTGATTGTAATAAGAGCTGGT
GGTGCCCCACCCCTGTCTGCTTATAGCCAATCACAG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
19-135, gnl|bosTau2|chr7 (26227130-26227246) |
|
19-135, gnl|canFam2|chr4 (39935141-39935037) |
|
19-135, gnl|danRer3|chrUn (116078595-116078491) |
|
19-135, gnl|fr1|chrUn (127339016-127338916) |
|
19-135, gnl|galGal2|chr13 (9359519-9359418) |
|
19-135, gnl|hg17|chr5 (175950809-175950913) |
|
19-135, gnl|Hg17|chr5 (175950815-175950931) |
|
19-135, gnl|loxAfr1|scaffold_68155 (11051-11154) |
|
19-135, gnl|monDom2|scaffold_6 (18567620-18567517) |
|
19-135, gnl|oryCun1|scaffold_194170 (34775-34880) |
|
19-135, gnl|rn3|chr17 (15941396-15941293) |
| |
|
272-575, gnl|bosTau2|chr7 (26230655-26230951) |
|
272-575, gnl|Hg17|chr5 (175955137-175955397) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
19-135, gnl|bosTau2|chr7 (26227130-26227246) |
|
19-135, gnl|canFam2|chr4 (39935141-39935037) |
|
19-135, gnl|danRer3|chrUn (116078595-116078491) |
|
19-135, gnl|fr1|chrUn (127339016-127338916) |
|
19-135, gnl|galGal2|chr13 (9359519-9359418) |
|
19-135, gnl|hg17|chr5 (175950809-175950913) |
|
19-135, gnl|Hg17|chr5 (175950815-175950931) |
|
19-135, gnl|loxAfr1|scaffold_68155 (11051-11154) |
|
19-135, gnl|monDom2|scaffold_6 (18567620-18567517) |
|
19-135, gnl|oryCun1|scaffold_194170 (34775-34880) |
|
19-135, gnl|rn3|chr17 (15941396-15941293) |
| |
|
272-575, gnl|bosTau2|chr7 (26230655-26230951) |
|
272-575, gnl|Hg17|chr5 (175955137-175955397) |
|
duo (0.345602) |
|
cje (0.330469) |
|
jej (0.197844) |
|
col (0.195008) |
|
eje (0.0988338) |
|
duo (0.345602) |
|
cje (0.330469) |
|
jej (0.197844) |
|
col (0.195008) |
|
eje (0.0988338) |
