Ss1.1-rduo412b_o17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCTACATGCATATACCACTTTTCTGTTTTGAGCTGGTATATTTTCCTCAATTTTTATATA TCACAAAAAGGAGAGGATCAGCAGAAATCCAAAATCTTTCCAAATGACGGACAATGGAAG TACTTGACATTCCTTAATCTGTTCTTACAGGCCATTTTCTATGGGGTGGCCTGCCTGGAA GACGTGCTGAAGAGAACTGAAGGGAAAAAAGACATAAAGTTTGTAACTGCCTTCAGAGAC CTGCTTTTCACCACACTGGCTTTTCCAATATCTGCTTTTGTATTTTTGTCATTCTGGATC ATCTTCCTCTATGATCGAGAACTTGTTTACCCTAAGGCCATAGATGATATCTTTCCAGGA TGGCTGAATCATGCAATGCACACAGCCATACTGCCCTTCTCACTGGTCGAAATCATCCTC AGGCCACACTGCTATCCACTGAAGACGAAAGGACTCACCTTGTTTGCTGCTGTTAGCCTC GCTTATATAAGCAGGGTTCTATGGATCTACTCTGAGACAGGTACATGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCTACATGCATATACCACTTTTCTGTTTTGAGCTGGTATATTTTCCTCAATTTTTATATA TCACAAAAAGGAGAGGATCAGCAGAAATCCAAAATCTTTCCAAATGACGGACAATGGAAG TACTTGACATTCCTTAATCTGTTCTTACAGGCCATTTTCTATGGGGTGGCCTGCCTGGAA GACGTGCTGAAGAGAACTGAAGGGAAAAAAGACATAAAGTTTGTAACTGCCTTCAGAGAC CTGCTTTTCACCACACTGGCTTTTCCAATATCTGCTTTTGTATTTTTGTCATTCTGGATC ATCTTCCTCTATGATCGAGAACTTGTTTACCCTAAGGCCATAGATGATATCTTTCCAGGA TGGCTGAATCATGCAATGCACACAGCCATACTGCCCTTCTCACTGGTCGAAATCATCCTC AGGCCACACTGCTATCCACTGAAGACGAAAGGACTCACCTTGTTTGCTGCTGTTAGCCTC GCTTATATAAGCAGGGTTCTATGGATCTACTCTGAGACAGGTACATGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 1-141, gnl|bosTau2|chr23 (34112631-34112771) | |
| 1-141, gnl|canFam2|chr35 (14371153-14371649) | |
| 1-141, gnl|echTel1|scaffold_291383 (48435-47762) | |
| 1-141, gnl|galGal2|chr2 (62630976-62630441) | |
| 1-141, gnl|hg17|chr6 (11886700-11887188) | |
| 1-141, gnl|Hg17|chr6 (11886966-11886826) | |
| 1-141, gnl|loxAfr1|scaffold_12961 (36065-36552) | |
| 1-141, gnl|mm7|chr13 (41257769-41258226) | |
| 1-141, gnl|Mm7|chr13 (41258022-41257882) | |
| 1-141, gnl|monDom2|scaffold_3 (99033153-99033660) | |
| 1-141, gnl|oryCun1|scaffold_9086 (3224-2742) | |
| 1-141, gnl|panTro1|chr5 (12165295-12165783) | |
| 1-141, gnl|rheMac2|chr4 (11743860-11744347) | |
| 1-141, gnl|rn3|chr17 (28818878-28818394) | |
| 143-272, gnl|bosTau2|chr23 (34124803-34124932) | |
| 143-272, gnl|Hg17|chr6 (11876601-11876472) | |
| 277-378, gnl|bosTau2|chr23 (34126552-34126653) | |
| 277-378, gnl|canFam2|chr35 (14359774-14359908) | |
| 277-378, gnl|danRer3|chr23 (1461864-1461731) | |
| 277-378, gnl|dasNov1|scaffold_179188 (5250-5384) | |
| 277-378, gnl|echTel1|scaffold_308579 (9525-9391) | |
| 277-378, gnl|galGal2|chr2 (62639685-62639552) | |
| 277-378, gnl|hg17|chr6 (11874487-11874622) | |
| 277-378, gnl|Hg17|chr6 (11874594-11874493) | |
| 277-378, gnl|loxAfr1|scaffold_12961 (6621-6755) | |
| 277-378, gnl|mm7|chr10 (13504424-13504544) | |
| 277-378, gnl|Mm7|chr10 (13504531-13504430) | |
| 277-378, gnl|monDom2|scaffold_3 (99006753-99006886) | |
| 277-378, gnl|oryCun1|scaffold_214952 (60879-61013) | |
| 277-378, gnl|panTro1|chr5 (12153014-12153149) | |
| 277-378, gnl|rheMac2|chr4 (11731318-11731453) | |
| 277-378, gnl|rn3|chr17 (28832978-28832845) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-141, gnl|bosTau2|chr23 (34112631-34112771) | |
| 1-141, gnl|canFam2|chr35 (14371153-14371649) | |
| 1-141, gnl|echTel1|scaffold_291383 (48435-47762) | |
| 1-141, gnl|galGal2|chr2 (62630976-62630441) | |
| 1-141, gnl|hg17|chr6 (11886700-11887188) | |
| 1-141, gnl|Hg17|chr6 (11886966-11886826) | |
| 1-141, gnl|loxAfr1|scaffold_12961 (36065-36552) | |
| 1-141, gnl|mm7|chr13 (41257769-41258226) | |
| 1-141, gnl|Mm7|chr13 (41258022-41257882) | |
| 1-141, gnl|monDom2|scaffold_3 (99033153-99033660) | |
| 1-141, gnl|oryCun1|scaffold_9086 (3224-2742) | |
| 1-141, gnl|panTro1|chr5 (12165295-12165783) | |
| 1-141, gnl|rheMac2|chr4 (11743860-11744347) | |
| 1-141, gnl|rn3|chr17 (28818878-28818394) | |
| 143-272, gnl|bosTau2|chr23 (34124803-34124932) | |
| 143-272, gnl|Hg17|chr6 (11876601-11876472) | |
| 277-378, gnl|bosTau2|chr23 (34126552-34126653) | |
| 277-378, gnl|canFam2|chr35 (14359774-14359908) | |
| 277-378, gnl|danRer3|chr23 (1461864-1461731) | |
| 277-378, gnl|dasNov1|scaffold_179188 (5250-5384) | |
| 277-378, gnl|echTel1|scaffold_308579 (9525-9391) | |
| 277-378, gnl|galGal2|chr2 (62639685-62639552) | |
| 277-378, gnl|hg17|chr6 (11874487-11874622) | |
| 277-378, gnl|Hg17|chr6 (11874594-11874493) | |
| 277-378, gnl|loxAfr1|scaffold_12961 (6621-6755) | |
| 277-378, gnl|mm7|chr10 (13504424-13504544) | |
| 277-378, gnl|Mm7|chr10 (13504531-13504430) | |
| 277-378, gnl|monDom2|scaffold_3 (99006753-99006886) | |
| 277-378, gnl|oryCun1|scaffold_214952 (60879-61013) | |
| 277-378, gnl|panTro1|chr5 (12153014-12153149) | |
| 277-378, gnl|rheMac2|chr4 (11731318-11731453) | |
| 277-378, gnl|rn3|chr17 (28832978-28832845) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| rec (0.17307) | |
| duo (0.172801) | |
| nco (0.161734) | |
| lun (0.150489) | |
| jej (0.0989218) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| rec (0.17307) | |
| duo (0.172801) | |
| nco (0.161734) | |
| lun (0.150489) | |
| jej (0.0989218) |