Non-Coding RNA Search

Ss1.1-rduo417b_k7.5

Sequence:


               
               GAGGTACTGTGAAGCAGGGCTTTTGTTTTTCGGCAACATATGTTTAAAAATTTGTCTTCT
GCCTCTCCGTACAAAGTCTTTCTCAAGGGAATTAAAAGGATGAATTAGTGACCTTTCAAC
TCTCTCACAGTAAGATGAATATGTTGTGAACAAAGGTAGAAACGTTTACCTCACGGCTGG
CGGAGTGTGTTCAGCATCCACCAGGAGCCTTCAAAGCACTTCCCGCCACGACTGGGCGAG
CGCTTGAATCTTTCACTACTTGAGGAGGGGGTGGGGACTGCTCAGCTCACACATGTGTGC
AACAGATTCACAGATTGGAAATTCATTTCATAAAATTGCAACAGTAACATCCTATTTTGT
AAATGAAAATCGTATCTGTGTTTACCTAACTGTGACTACTGTTCAGACTTTCTTCAGAAA
TCCTTTTTATAGGCTTTCTTAGAAAAAAAAAAATTATTCCCTCTCTATGGATAATGTCTT
GATCTTCTGTATATATGTTTTATTAATGTGTAAATATTTAGATTTTTTAAGATTACTATG
TTCTTTTAAAAAAAATTTCAGCGCAAAGCTAGTTGTGAAAATGTTGTATAACATGTGTTG
TGTTATCAAGTCCCAAGATGCCCTTTATGTCCGTTCTGGAAGAATACAATAAATTACTTT
AATCGAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTACTGTGAAGCAGGGCTTTTGTTTTTCGGCAACATATGTTTAAAAATTTGTCTTCT
GCCTCTCCGTACAAAGTCTTTCTCAAGGGAATTAAAAGGATGAATTAGTGACCTTTCAAC
TCTCTCACAGTAAGATGAATATGTTGTGAACAAAGGTAGAAACGTTTACCTCACGGCTGG
CGGAGTGTGTTCAGCATCCACCAGGAGCCTTCAAAGCACTTCCCGCCACGACTGGGCGAG
CGCTTGAATCTTTCACTACTTGAGGAGGGGGTGGGGACTGCTCAGCTCACACATGTGTGC
AACAGATTCACAGATTGGAAATTCATTTCATAAAATTGCAACAGTAACATCCTATTTTGT
AAATGAAAATCGTATCTGTGTTTACCTAACTGTGACTACTGTTCAGACTTTCTTCAGAAA
TCCTTTTTATAGGCTTTCTTAGAAAAAAAAAAATTATTCCCTCTCTATGGATAATGTCTT
GATCTTCTGTATATATGTTTTATTAATGTGTAAATATTTAGATTTTTTAAGATTACTATG
TTCTTTTAAAAAAAATTTCAGCGCAAAGCTAGTTGTGAAAATGTTGTATAACATGTGTTG
TGTTATCAAGTCCCAAGATGCCCTTTATGTCCGTTCTGGAAGAATACAATAAATTACTTT
AATCGAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-667, gnl|bosTau2|chr13 (15246705-15247383)
               

               
               1-667, gnl|Hg17|chr10 (13523747-13523094)
               

               
               1-667, gnl|Mm7|chr2 (4718751-4719414)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-667, gnl|bosTau2|chr13 (15246705-15247383)
               

               
               1-667, gnl|Hg17|chr10 (13523747-13523094)
               

               
               1-667, gnl|Mm7|chr2 (4718751-4719414)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

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               duo (0.172801)
               

               
               fat (0.147427)
               

               
               ret (0.128733)
               

               
               tra (0.123092)
               

               
               spc (0.113366)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               fat (0.147427)
               

               
               ret (0.128733)
               

               
               tra (0.123092)
               

               
               spc (0.113366)

	1-667, gnl\|bosTau2\|chr13 (15246705-15247383)
	1-667, gnl\|Hg17\|chr10 (13523747-13523094)
	1-667, gnl\|Mm7\|chr2 (4718751-4719414)

	duo (0.172801)
	fat (0.147427)
	ret (0.128733)
	tra (0.123092)
	spc (0.113366)