Non-Coding RNA Search

Ss1.1-rduo419b_j11.5

Sequence:


               
               AAAAAACCCTATTGTTGAGAGATGTTTTATTTTGGAATGAGGGATAAGGGGTTACGGGCT
CACAGTTGTTCTCAGGTTGTTGGGAGGAGGAAGAGTGCCAGAAAAGCCTTCTAGACACAC
CTCATGGTGGGTGGGTGTGCAGTCTGAATCCAAAACCAAATCCACACGGCCAGGGGGGTG
GGCTTTTGGGTGGAGGGTGAACCGTGTACAGCTCTGGACTCGGCTGCACACCCGCGGGTG
ACGGTGCCTTAGAAGAGAGGCTTCCTGGGGTGGGAGAGAGAAGCCACTGCTTATGAGTCC
CCCCTCCATGTACCAGCGGGGGGACAGGAGGTGGTGCGTGTGCGCGTGGCCCAGGACTGT
CACACATCGCTTTATATTTCTTATAACAATGTTGTAATAAATATCTTCCTGCCGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAACCCTATTGTTGAGAGATGTTTTATTTTGGAATGAGGGATAAGGGGTTACGGGCT
CACAGTTGTTCTCAGGTTGTTGGGAGGAGGAAGAGTGCCAGAAAAGCCTTCTAGACACAC
CTCATGGTGGGTGGGTGTGCAGTCTGAATCCAAAACCAAATCCACACGGCCAGGGGGGTG
GGCTTTTGGGTGGAGGGTGAACCGTGTACAGCTCTGGACTCGGCTGCACACCCGCGGGTG
ACGGTGCCTTAGAAGAGAGGCTTCCTGGGGTGGGAGAGAGAAGCCACTGCTTATGAGTCC
CCCCTCCATGTACCAGCGGGGGGACAGGAGGTGGTGCGTGTGCGCGTGGCCCAGGACTGT
CACACATCGCTTTATATTTCTTATAACAATGTTGTAATAAATATCTTCCTGCCGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-282, gnl|bosTau2|chr15 (31841109-31841395)
               

               
               12-282, gnl|Hg17|chr11 (6180155-6179857)
               

               
               12-282, gnl|Mm7|chr7 (101428065-101427789)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-282, gnl|bosTau2|chr15 (31841109-31841395)
               

               
               12-282, gnl|Hg17|chr11 (6180155-6179857)
               

               
               12-282, gnl|Mm7|chr7 (101428065-101427789)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               lnt (0.284616)
               

               
               ill (0.175593)
               

               
               duo (0.172801)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.284616)
               

               
               ill (0.175593)
               

               
               duo (0.172801)

	12-282, gnl\|bosTau2\|chr15 (31841109-31841395)
	12-282, gnl\|Hg17\|chr11 (6180155-6179857)
	12-282, gnl\|Mm7\|chr7 (101428065-101427789)