Non-Coding RNA Search

Ss1.1-rduo426b_k15.5

Sequence:


               
               CAACATGGTGGTAGGTGTGGGAAAGGGTGTCGTTTCCTGCTCTGAAATTCTACGAGCCCA
AGAGAAAGTATCAAACACCTTAAAGGAAAAATAAGAGGGTTGTAATATGAGAAGTATGAA
AAAAAAGTCTATTGGAGGAAAAAACTGAGGAGAGAGAATCCAGTTGGGGCAATCAAGAAA
AGCCCACAGAGAAGTTAGCATTTGAGAAGTTCCTTTGAGGTTGCATAGAATCTCAAGAGA
CAGAGATAAGAGGTGAAAGGCAAGAGGCAAGGCATACCAGGTAGAGGGAATATTCTGAGA
AAAGTCAGAGATCCTGAGGAACATGGGACATGTCTGGGGACCTATGGGAGAACTTGACTT
TGATTATATCCTAGGGTGGGATCTAGAGAATATGATGTTGGGAAAGTGAGTTAGGTCCAT
ATTGTACAGGATCTCAAATACTAGACTGAGAAGTGTGCATAAATGCATTGGGCAACTGAG
AGATACTGAAGGTTTTTCAGCAGCACCATGATATTGTCCTGCTCTACAAAGGTTCACCTG
GAAGTCAGGGGAGATCCACTGGGATTAATGATTGGCAAGAGGAAGGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAACATGGTGGTAGGTGTGGGAAAGGGTGTCGTTTCCTGCTCTGAAATTCTACGAGCCCA
AGAGAAAGTATCAAACACCTTAAAGGAAAAATAAGAGGGTTGTAATATGAGAAGTATGAA
AAAAAAGTCTATTGGAGGAAAAAACTGAGGAGAGAGAATCCAGTTGGGGCAATCAAGAAA
AGCCCACAGAGAAGTTAGCATTTGAGAAGTTCCTTTGAGGTTGCATAGAATCTCAAGAGA
CAGAGATAAGAGGTGAAAGGCAAGAGGCAAGGCATACCAGGTAGAGGGAATATTCTGAGA
AAAGTCAGAGATCCTGAGGAACATGGGACATGTCTGGGGACCTATGGGAGAACTTGACTT
TGATTATATCCTAGGGTGGGATCTAGAGAATATGATGTTGGGAAAGTGAGTTAGGTCCAT
ATTGTACAGGATCTCAAATACTAGACTGAGAAGTGTGCATAAATGCATTGGGCAACTGAG
AGATACTGAAGGTTTTTCAGCAGCACCATGATATTGTCCTGCTCTACAAAGGTTCACCTG
GAAGTCAGGGGAGATCCACTGGGATTAATGATTGGCAAGAGGAAGGAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-588, gnl|bosTau2|chr2 (57989515-57988964)
               

               
               3-588, gnl|Hg17|chr2 (207657514-207658116)
               

               
               3-588, gnl|Mm7|chr1 (64174510-64174985)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-588, gnl|bosTau2|chr2 (57989515-57988964)
               

               
               3-588, gnl|Hg17|chr2 (207657514-207658116)
               

               
               3-588, gnl|Mm7|chr1 (64174510-64174985)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ill (0.175593)
               

               
               duo (0.172801)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ill (0.175593)
               

               
               duo (0.172801)

	3-588, gnl\|bosTau2\|chr2 (57989515-57988964)
	3-588, gnl\|Hg17\|chr2 (207657514-207658116)
	3-588, gnl\|Mm7\|chr1 (64174510-64174985)