Ss1.1-rduo433b_c16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCTGCGAGGCCATCAGCTTCCTCCTGTCCCTCCTCGACAGGCTGGTCCTGTACTGCGGG AGCCGGCTGGGCAAATACTACGTCAAGGAAAGGTCCAAGGCGATGGTGGCTTGCTACCCA GGAAATGGAACAGGTTACGTTCGACATGTTGACAACCCCAACGGCGACGGCCGCTGCATC ACCTGCATCTACTATCTGAACAAGAATTGGGATGCCAAGCTACACGGTGGGATCCTGCGG ATATTTCCAGAAGGGAAATCATTCATAGCAGATGTGGAGCCCATTTTTGACAGACTCTTG TTCTTCTGGTCAGACCGCAGGAACCCACATGAAGTCCAGCCTTCCTATGCGACCAGATAT GCCATGACTGTTTGGTACTTCGATGCTGAAGAGAGGGCCGAAGCCAAAAAGAAATTCAGG AATTTGACTAGGAAAACCGAGCCTGCCCTCACTGAGGACTGACCCTGCTCTGAAATCCGC TGGCCTCATTCATCTTAGTAACAGTTCCTGAATTCTCTTTAAGAGTTGAGGAAGGCCTCT TCTGCAGGGACTCGGTGATGAGAACCCCTTACTATTGCTTGCATCATTCACATCCCTGTC TTGCGTATGGTACTTTGTGTTTTCTTGCCAAGACTGCATCCACCTCCAGACACTTTGCCA GACGAACTCATTTACTAACTCCAGAAATACCTGCAGACAACCTAGCTGGCCAGCGGTGTA ATTGATAGATTTGGTGATCCTGGCTTTTGAAGCAAGAACCTGGAAGCATGAGCGAGGGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCTGCGAGGCCATCAGCTTCCTCCTGTCCCTCCTCGACAGGCTGGTCCTGTACTGCGGG AGCCGGCTGGGCAAATACTACGTCAAGGAAAGGTCCAAGGCGATGGTGGCTTGCTACCCA GGAAATGGAACAGGTTACGTTCGACATGTTGACAACCCCAACGGCGACGGCCGCTGCATC ACCTGCATCTACTATCTGAACAAGAATTGGGATGCCAAGCTACACGGTGGGATCCTGCGG ATATTTCCAGAAGGGAAATCATTCATAGCAGATGTGGAGCCCATTTTTGACAGACTCTTG TTCTTCTGGTCAGACCGCAGGAACCCACATGAAGTCCAGCCTTCCTATGCGACCAGATAT GCCATGACTGTTTGGTACTTCGATGCTGAAGAGAGGGCCGAAGCCAAAAAGAAATTCAGG AATTTGACTAGGAAAACCGAGCCTGCCCTCACTGAGGACTGACCCTGCTCTGAAATCCGC TGGCCTCATTCATCTTAGTAACAGTTCCTGAATTCTCTTTAAGAGTTGAGGAAGGCCTCT TCTGCAGGGACTCGGTGATGAGAACCCCTTACTATTGCTTGCATCATTCACATCCCTGTC TTGCGTATGGTACTTTGTGTTTTCTTGCCAAGACTGCATCCACCTCCAGACACTTTGCCA GACGAACTCATTTACTAACTCCAGAAATACCTGCAGACAACCTAGCTGGCCAGCGGTGTA ATTGATAGATTTGGTGATCCTGGCTTTTGAAGCAAGAACCTGGAAGCATGAGCGAGGGCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 98-230, gnl|bosTau2|chr18 (45491643-45491776) | |
| 98-230, gnl|canFam2|chr1 (115903211-115903058) | |
| 98-230, gnl|canFam2|chr4 (11101117-11101204) | |
| 98-230, gnl|danRer3|chr11 (33289127-33289040) | |
| 98-230, gnl|danRer3|chr15 (20615892-20615746) | |
| 98-230, gnl|dasNov1|scaffold_3567 (116034-116188) | |
| 98-230, gnl|dasNov1|scaffold_52364 (4897-4985) | |
| 98-230, gnl|echTel1|scaffold_297428 (4224-4137) | |
| 98-230, gnl|echTel1|scaffold_58942 (1067-1219) | |
| 98-230, gnl|fr1|chrUn (270157279-270157192) | |
| 98-230, gnl|fr1|chrUn (270157313-270157158) | |
| 98-230, gnl|galGal2|chr3 (35897391-35897478) | |
| 98-230, gnl|hg17|chr15 (82978492-82978585) | |
| 98-230, gnl|hg17|chr19 (46004266-46004420) | |
| 98-230, gnl|Hg17|chr19 (46004298-46004447) | |
| 98-230, gnl|loxAfr1|scaffold_51013 (7676-7763) | |
| 98-230, gnl|loxAfr1|scaffold_5945 (41462-41341) | |
| 98-230, gnl|mm7|chr7 (24079301-24079148) | |
| 98-230, gnl|Mm7|chr7 (24079268-24079135) | |
| 98-230, gnl|mm7|chr8 (123503181-123503094) | |
| 98-230, gnl|monDom2|scaffold_13 (56099881-56099971) | |
| 98-230, gnl|monDom2|scaffold_149 (402788-402930) | |
| 98-230, gnl|oryCun1|scaffold_174467 (44261-44107) | |
| 98-230, gnl|oryCun1|scaffold_192844 (5938-5845) | |
| 98-230, gnl|panTro1|chr16 (83781430-83781522) | |
| 98-230, gnl|panTro1|chr20 (42993035-42993189) | |
| 98-230, gnl|rheMac2|chr1 (225580974-225581061) | |
| 98-230, gnl|rheMac2|chr19 (47173532-47173686) | |
| 98-230, gnl|rn3|chr1 (82313083-82312930) | |
| 98-230, gnl|rn3|chr15 (6317781-6317867) | |
| 98-230, gnl|tetNig1|chr16 (1385940-1385799) | |
| 98-230, gnl|tetNig1|chr17 (1899525-1899612) | |
| 98-230, gnl|xenTro1|scaffold_728 (612001-612123) | |
| 98-230, gnl|xenTro1|scaffold_986 (215402-215313) | |
| 431-566, gnl|bosTau2|chr4 (61324708-61324851) | |
| 431-566, gnl|canFam2|chr8 (15877201-15877510) | |
| 431-566, gnl|dasNov1|scaffold_58072 (4351-4029) | |
| 431-566, gnl|echTel1|scaffold_293915 (3296-3596) | |
| 431-566, gnl|galGal2|chr5 (32581248-32581558) | |
| 431-566, gnl|hg17|chr14 (33464633-33464939) | |
| 431-566, gnl|Hg17|chr14 (33464879-33464748) | |
| 431-566, gnl|loxAfr1|scaffold_5945 (33857-34176) | |
| 431-566, gnl|mm7|chr12 (52199034-52199309) | |
| 431-566, gnl|monDom2|scaffold_53 (7325959-7326280) | |
| 431-566, gnl|oryCun1|scaffold_207999 (7551-7838) | |
| 431-566, gnl|panTro1|chr15 (32613077-32613383) | |
| 431-566, gnl|rheMac2|chr7 (96860717-96861019) | |
| 431-566, gnl|rn3|chr6 (74455528-74455809) | |
| 581-778, gnl|bosTau2|chr4 (61324887-61325088) | |
| 581-778, gnl|canFam2|chr8 (15876667-15877288) | |
| 581-778, gnl|dasNov1|scaffold_58072 (4871-4266) | |
| 581-778, gnl|echTel1|scaffold_290030 (3151-2569) | |
| 581-778, gnl|hg17|chr12 (16015060-16015663) | |
| 581-778, gnl|Hg17|chr14 (33464731-33464535) | |
| 581-778, gnl|loxAfr1|scaffold_5945 (33335-33941) | |
| 581-778, gnl|mm7|chr12 (52198560-52199120) | |
| 581-778, gnl|Mm7|chr12 (52199132-52198951) | |
| 581-778, gnl|oryCun1|scaffold_99927 (2186-1601) | |
| 581-778, gnl|panTro1|chrUn_random (42290021-42290623) | |
| 581-778, gnl|rheMac2|chr11 (16370479-16371092) | |
| 581-778, gnl|rn3|chr6 (74455042-74455614) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 98-230, gnl|bosTau2|chr18 (45491643-45491776) | |
| 98-230, gnl|canFam2|chr1 (115903211-115903058) | |
| 98-230, gnl|canFam2|chr4 (11101117-11101204) | |
| 98-230, gnl|danRer3|chr11 (33289127-33289040) | |
| 98-230, gnl|danRer3|chr15 (20615892-20615746) | |
| 98-230, gnl|dasNov1|scaffold_3567 (116034-116188) | |
| 98-230, gnl|dasNov1|scaffold_52364 (4897-4985) | |
| 98-230, gnl|echTel1|scaffold_297428 (4224-4137) | |
| 98-230, gnl|echTel1|scaffold_58942 (1067-1219) | |
| 98-230, gnl|fr1|chrUn (270157279-270157192) | |
| 98-230, gnl|fr1|chrUn (270157313-270157158) | |
| 98-230, gnl|galGal2|chr3 (35897391-35897478) | |
| 98-230, gnl|hg17|chr15 (82978492-82978585) | |
| 98-230, gnl|hg17|chr19 (46004266-46004420) | |
| 98-230, gnl|Hg17|chr19 (46004298-46004447) | |
| 98-230, gnl|loxAfr1|scaffold_51013 (7676-7763) | |
| 98-230, gnl|loxAfr1|scaffold_5945 (41462-41341) | |
| 98-230, gnl|mm7|chr7 (24079301-24079148) | |
| 98-230, gnl|Mm7|chr7 (24079268-24079135) | |
| 98-230, gnl|mm7|chr8 (123503181-123503094) | |
| 98-230, gnl|monDom2|scaffold_13 (56099881-56099971) | |
| 98-230, gnl|monDom2|scaffold_149 (402788-402930) | |
| 98-230, gnl|oryCun1|scaffold_174467 (44261-44107) | |
| 98-230, gnl|oryCun1|scaffold_192844 (5938-5845) | |
| 98-230, gnl|panTro1|chr16 (83781430-83781522) | |
| 98-230, gnl|panTro1|chr20 (42993035-42993189) | |
| 98-230, gnl|rheMac2|chr1 (225580974-225581061) | |
| 98-230, gnl|rheMac2|chr19 (47173532-47173686) | |
| 98-230, gnl|rn3|chr1 (82313083-82312930) | |
| 98-230, gnl|rn3|chr15 (6317781-6317867) | |
| 98-230, gnl|tetNig1|chr16 (1385940-1385799) | |
| 98-230, gnl|tetNig1|chr17 (1899525-1899612) | |
| 98-230, gnl|xenTro1|scaffold_728 (612001-612123) | |
| 98-230, gnl|xenTro1|scaffold_986 (215402-215313) | |
| 431-566, gnl|bosTau2|chr4 (61324708-61324851) | |
| 431-566, gnl|canFam2|chr8 (15877201-15877510) | |
| 431-566, gnl|dasNov1|scaffold_58072 (4351-4029) | |
| 431-566, gnl|echTel1|scaffold_293915 (3296-3596) | |
| 431-566, gnl|galGal2|chr5 (32581248-32581558) | |
| 431-566, gnl|hg17|chr14 (33464633-33464939) | |
| 431-566, gnl|Hg17|chr14 (33464879-33464748) | |
| 431-566, gnl|loxAfr1|scaffold_5945 (33857-34176) | |
| 431-566, gnl|mm7|chr12 (52199034-52199309) | |
| 431-566, gnl|monDom2|scaffold_53 (7325959-7326280) | |
| 431-566, gnl|oryCun1|scaffold_207999 (7551-7838) | |
| 431-566, gnl|panTro1|chr15 (32613077-32613383) | |
| 431-566, gnl|rheMac2|chr7 (96860717-96861019) | |
| 431-566, gnl|rn3|chr6 (74455528-74455809) | |
| 581-778, gnl|bosTau2|chr4 (61324887-61325088) | |
| 581-778, gnl|canFam2|chr8 (15876667-15877288) | |
| 581-778, gnl|dasNov1|scaffold_58072 (4871-4266) | |
| 581-778, gnl|echTel1|scaffold_290030 (3151-2569) | |
| 581-778, gnl|hg17|chr12 (16015060-16015663) | |
| 581-778, gnl|Hg17|chr14 (33464731-33464535) | |
| 581-778, gnl|loxAfr1|scaffold_5945 (33335-33941) | |
| 581-778, gnl|mm7|chr12 (52198560-52199120) | |
| 581-778, gnl|Mm7|chr12 (52199132-52198951) | |
| 581-778, gnl|oryCun1|scaffold_99927 (2186-1601) | |
| 581-778, gnl|panTro1|chrUn_random (42290021-42290623) | |
| 581-778, gnl|rheMac2|chr11 (16370479-16371092) | |
| 581-778, gnl|rn3|chr6 (74455042-74455614) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.172801) | |
| ldo (0.0970026) |