Non-Coding RNA Search

Ss1.1-rduo434b_c3.5

Sequence:


               
               TTGTCAAGTGCATCAGTAGGAATGCGGGAAGCTATGTCCTTCTTATACAAGAAGAATCCA
ATGAAGACACCTCAGACAGATGATTAACTGTGATTAAAAAAACAACCCCTCAAATGCGCA
TACATACACTTTGACTTCTGCAGGATGTGAACTAGCTCCACAATCAATAATTCATGAACA
ATCAATGCTGCCAGTCCTTTCTTCTAAACTGAACAGAGAAGTAGTCCCCAGCTCTAGTTT
CTTACAGAACCATGCACTTTGAGCACTTTATGAAGACATGGGATATATTTCCAAAACAAA
GAAGAATAGATCTCAAGACCCTTCCCACGTGGGGATTTACCAAAGAAACGGAAATGTATG
GGTATCATGCAGGACTAAGAAATGTGATCCAATAATCAAAGCAATAATCTCCCTGATCTG
CTCGTCTCTCAGATTGAGACCAAGAACTCTGCTTGCCTTGGCTGCTTCATCTGCAAAATG
GGTTTCTGACCTCTCTCAAGGATTTTGAAGGTATAACTGTTGAACATCATGATGAGTCAT
TCAGTGATAGGAACATGATAGAAGCTTGATATTTATAGTATGAATTCACCTCTGCTTGGG
TAACACTTGGTTTTACAGAGCCCGTCCAGGTGTCAGGGATAGTCAAAGTTTTCAGTAGCT
AAAAGCTACTTCCTTTAAAAAGGAAGTGCTTTAATGAATACTGTTTTCACTTTTCTAATA
TGTTTCAGCATTGACGGGCATGACAATATTTCTATAAGTAACACAGGGGTGACTGGGAAA
AAAAAAGATTGTAACTGGTTTCTAAGGAAACGTAAAAACGGAGGAAACAGCCAATCAGGA
TGTAACGTAATTCGTATTTACAGAACCAACACTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTCAAGTGCATCAGTAGGAATGCGGGAAGCTATGTCCTTCTTATACAAGAAGAATCCA
ATGAAGACACCTCAGACAGATGATTAACTGTGATTAAAAAAACAACCCCTCAAATGCGCA
TACATACACTTTGACTTCTGCAGGATGTGAACTAGCTCCACAATCAATAATTCATGAACA
ATCAATGCTGCCAGTCCTTTCTTCTAAACTGAACAGAGAAGTAGTCCCCAGCTCTAGTTT
CTTACAGAACCATGCACTTTGAGCACTTTATGAAGACATGGGATATATTTCCAAAACAAA
GAAGAATAGATCTCAAGACCCTTCCCACGTGGGGATTTACCAAAGAAACGGAAATGTATG
GGTATCATGCAGGACTAAGAAATGTGATCCAATAATCAAAGCAATAATCTCCCTGATCTG
CTCGTCTCTCAGATTGAGACCAAGAACTCTGCTTGCCTTGGCTGCTTCATCTGCAAAATG
GGTTTCTGACCTCTCTCAAGGATTTTGAAGGTATAACTGTTGAACATCATGATGAGTCAT
TCAGTGATAGGAACATGATAGAAGCTTGATATTTATAGTATGAATTCACCTCTGCTTGGG
TAACACTTGGTTTTACAGAGCCCGTCCAGGTGTCAGGGATAGTCAAAGTTTTCAGTAGCT
AAAAGCTACTTCCTTTAAAAAGGAAGTGCTTTAATGAATACTGTTTTCACTTTTCTAATA
TGTTTCAGCATTGACGGGCATGACAATATTTCTATAAGTAACACAGGGGTGACTGGGAAA
AAAAAAGATTGTAACTGGTTTCTAAGGAAACGTAAAAACGGAGGAAACAGCCAATCAGGA
TGTAACGTAATTCGTATTTACAGAACCAACACTCAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-876, gnl|bosTau2|chr12 (16334497-16333665)
               

               
               1-876, gnl|Hg17|chr13 (28173716-28172794)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-876, gnl|bosTau2|chr12 (16334497-16333665)
               

               
               1-876, gnl|Hg17|chr13 (28173716-28172794)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               duo (0.172801)
               

               
               jej (0.0989218)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               duo (0.172801)
               

               
               jej (0.0989218)

	1-876, gnl\|bosTau2\|chr12 (16334497-16333665)
	1-876, gnl\|Hg17\|chr13 (28173716-28172794)