Ss1.1-rduo434b_g3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAGCTACCAAGCCCCGCTAGGAGCTCCAGGCTCAGCTGGGACCCATCCCTTTGGAGCAGC TGCTTCAGACTAGGCTGGGAAGTACCGAGCTCTCGTGGTCAAGGAAGCCATGGAGGAGAG AGCTGGTCGTCTGGAAAAGCTACAGCACTGGGCGAGGCACAGGCAGAGTGGGCACCTCTT GGTGCTGGCGGTGAGCCAGCTATGGCTGGCAGTGGCTGTGGTGCCCTTTGCTATCTCAGT TGCCTGCCTGAACTCTGCTTGTCACATGGCCACAGCACTGCCACTTGGGCCTGGAGTACT GGGTTTCCTCACTGGGATTGTTACCCTTGAGCTGCGCAGAGCACCCCGTTTCTGGAAGGT GCGTGCCATGATGATATTCAACCTCTTCAATCTGATCTTGGGCTTCATCGCGTTGGTGAT TGAGGTGATGAAGACAGCCTTGATGTCTGCCCCAAATATCCCCTCCCAGCTAGAGGGCTT GCTGGTGCTTGAGCTCAGCGCTGAAGCCTTCACTCTAGGGGGAGTGCTGGTCTCAGCATA CTCCCTGATCCTGCTGAGCCAGAGGAAGCGAGGATGCTGCAGGAGCCAGAGTCTGCACTA CCAGGAACTGCAAGAGGGTCTCTCAGAGTTGGAGGAAGTTCCTGATTTGGAGAATGGTCC CACCGTGACTAGCACAGCAAACAGAACGAATGAGTGAACTGGCAAGGGGAAGAGTACAGG TGCTGCTCTCCTACCCTAGAGAAGCGTTCTCCAGACACTCCTGCACCCCATCCCCACAGA ACTCAAACTAGATGGAGTCCCTTA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAGCTACCAAGCCCCGCTAGGAGCTCCAGGCTCAGCTGGGACCCATCCCTTTGGAGCAGC TGCTTCAGACTAGGCTGGGAAGTACCGAGCTCTCGTGGTCAAGGAAGCCATGGAGGAGAG AGCTGGTCGTCTGGAAAAGCTACAGCACTGGGCGAGGCACAGGCAGAGTGGGCACCTCTT GGTGCTGGCGGTGAGCCAGCTATGGCTGGCAGTGGCTGTGGTGCCCTTTGCTATCTCAGT TGCCTGCCTGAACTCTGCTTGTCACATGGCCACAGCACTGCCACTTGGGCCTGGAGTACT GGGTTTCCTCACTGGGATTGTTACCCTTGAGCTGCGCAGAGCACCCCGTTTCTGGAAGGT GCGTGCCATGATGATATTCAACCTCTTCAATCTGATCTTGGGCTTCATCGCGTTGGTGAT TGAGGTGATGAAGACAGCCTTGATGTCTGCCCCAAATATCCCCTCCCAGCTAGAGGGCTT GCTGGTGCTTGAGCTCAGCGCTGAAGCCTTCACTCTAGGGGGAGTGCTGGTCTCAGCATA CTCCCTGATCCTGCTGAGCCAGAGGAAGCGAGGATGCTGCAGGAGCCAGAGTCTGCACTA CCAGGAACTGCAAGAGGGTCTCTCAGAGTTGGAGGAAGTTCCTGATTTGGAGAATGGTCC CACCGTGACTAGCACAGCAAACAGAACGAATGAGTGAACTGGCAAGGGGAAGAGTACAGG TGCTGCTCTCCTACCCTAGAGAAGCGTTCTCCAGACACTCCTGCACCCCATCCCCACAGA ACTCAAACTAGATGGAGTCCCTTA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 190-302, gnl|bosTau2|chr10 (15644549-15644661) | |
| 190-302, gnl|canFam2|chr15 (21196999-21197166) | |
| 190-302, gnl|dasNov1|scaffold_169113 (7057-6852) | |
| 190-302, gnl|echTel1|scaffold_293447 (12223-12018) | |
| 190-302, gnl|hg17|chr14 (20639788-20639993) | |
| 190-302, gnl|Hg17|chr14 (20639863-20639975) | |
| 190-302, gnl|loxAfr1|scaffold_3753 (28906-28698) | |
| 190-302, gnl|mm7|chr14 (47351357-47351559) | |
| 190-302, gnl|Mm7|chr14 (47351430-47351542) | |
| 190-302, gnl|monDom2|scaffold_12 (29372857-29372647) | |
| 190-302, gnl|oryCun1|scaffold_172423 (22759-22552) | |
| 190-302, gnl|panTro1|chrUn_random (21936563-21936764) | |
| 190-302, gnl|rheMac2|chr7 (83815776-83815981) | |
| 190-302, gnl|rn3|chr15 (27461422-27461607) | |
| 352-472, gnl|bosTau2|chr10 (15645085-15645205) | |
| 352-472, gnl|canFam2|chr15 (21197520-21198141) | |
| 352-472, gnl|dasNov1|scaffold_92513 (1058-400) | |
| 352-472, gnl|echTel1|scaffold_293447 (11675-11094) | |
| 352-472, gnl|hg17|chr14 (20640326-20640937) | |
| 352-472, gnl|Hg17|chr14 (20640397-20640517) | |
| 352-472, gnl|loxAfr1|scaffold_3753 (28283-27662) | |
| 352-472, gnl|mm7|chr14 (47352144-47352708) | |
| 352-472, gnl|Mm7|chr14 (47352215-47352335) | |
| 352-472, gnl|monDom2|scaffold_12 (29372338-29371752) | |
| 352-472, gnl|oryCun1|scaffold_172423 (22209-21599) | |
| 352-472, gnl|panTro1|chrUn_random (21937096-21937707) | |
| 352-472, gnl|rheMac2|chr7 (83816314-83816920) | |
| 352-472, gnl|rn3|chr15 (27462162-27462725) | |
| 615-801, gnl|bosTau2|chr10 (15646016-15646201) | |
| 615-801, gnl|canFam2|chr15 (21198142-21198552) | |
| 615-801, gnl|dasNov1|scaffold_92513 (399-8) | |
| 615-801, gnl|echTel1|scaffold_293447 (11093-10699) | |
| 615-801, gnl|hg17|chr14 (20640938-20641336) | |
| 615-801, gnl|Hg17|chr14 (20641136-20641320) | |
| 615-801, gnl|loxAfr1|scaffold_3753 (27661-27283) | |
| 615-801, gnl|mm7|chr14 (47352709-47353079) | |
| 615-801, gnl|Mm7|chr14 (47352884-47353063) | |
| 615-801, gnl|monDom2|scaffold_12 (29371751-29371284) | |
| 615-801, gnl|oryCun1|scaffold_172423 (21598-21213) | |
| 615-801, gnl|panTro1|chrUn_random (21937708-21938106) | |
| 615-801, gnl|rheMac2|chr7 (83816921-83817317) | |
| 615-801, gnl|rn3|chr15 (27462726-27463094) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 190-302, gnl|bosTau2|chr10 (15644549-15644661) | |
| 190-302, gnl|canFam2|chr15 (21196999-21197166) | |
| 190-302, gnl|dasNov1|scaffold_169113 (7057-6852) | |
| 190-302, gnl|echTel1|scaffold_293447 (12223-12018) | |
| 190-302, gnl|hg17|chr14 (20639788-20639993) | |
| 190-302, gnl|Hg17|chr14 (20639863-20639975) | |
| 190-302, gnl|loxAfr1|scaffold_3753 (28906-28698) | |
| 190-302, gnl|mm7|chr14 (47351357-47351559) | |
| 190-302, gnl|Mm7|chr14 (47351430-47351542) | |
| 190-302, gnl|monDom2|scaffold_12 (29372857-29372647) | |
| 190-302, gnl|oryCun1|scaffold_172423 (22759-22552) | |
| 190-302, gnl|panTro1|chrUn_random (21936563-21936764) | |
| 190-302, gnl|rheMac2|chr7 (83815776-83815981) | |
| 190-302, gnl|rn3|chr15 (27461422-27461607) | |
| 352-472, gnl|bosTau2|chr10 (15645085-15645205) | |
| 352-472, gnl|canFam2|chr15 (21197520-21198141) | |
| 352-472, gnl|dasNov1|scaffold_92513 (1058-400) | |
| 352-472, gnl|echTel1|scaffold_293447 (11675-11094) | |
| 352-472, gnl|hg17|chr14 (20640326-20640937) | |
| 352-472, gnl|Hg17|chr14 (20640397-20640517) | |
| 352-472, gnl|loxAfr1|scaffold_3753 (28283-27662) | |
| 352-472, gnl|mm7|chr14 (47352144-47352708) | |
| 352-472, gnl|Mm7|chr14 (47352215-47352335) | |
| 352-472, gnl|monDom2|scaffold_12 (29372338-29371752) | |
| 352-472, gnl|oryCun1|scaffold_172423 (22209-21599) | |
| 352-472, gnl|panTro1|chrUn_random (21937096-21937707) | |
| 352-472, gnl|rheMac2|chr7 (83816314-83816920) | |
| 352-472, gnl|rn3|chr15 (27462162-27462725) | |
| 615-801, gnl|bosTau2|chr10 (15646016-15646201) | |
| 615-801, gnl|canFam2|chr15 (21198142-21198552) | |
| 615-801, gnl|dasNov1|scaffold_92513 (399-8) | |
| 615-801, gnl|echTel1|scaffold_293447 (11093-10699) | |
| 615-801, gnl|hg17|chr14 (20640938-20641336) | |
| 615-801, gnl|Hg17|chr14 (20641136-20641320) | |
| 615-801, gnl|loxAfr1|scaffold_3753 (27661-27283) | |
| 615-801, gnl|mm7|chr14 (47352709-47353079) | |
| 615-801, gnl|Mm7|chr14 (47352884-47353063) | |
| 615-801, gnl|monDom2|scaffold_12 (29371751-29371284) | |
| 615-801, gnl|oryCun1|scaffold_172423 (21598-21213) | |
| 615-801, gnl|panTro1|chrUn_random (21937708-21938106) | |
| 615-801, gnl|rheMac2|chr7 (83816921-83817317) | |
| 615-801, gnl|rn3|chr15 (27462726-27463094) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| duo (0.345602) | |
| cje (0.165235) |