Non-Coding RNA Search

Ss1.1-rebs02c_f8.5

Sequence:


               
               GGAAATGAACACAGACACACACACACGGTGTGGAAGGTGACAAGTCTGATGGCTGGAAGG
ACCAAATTCAATAGGACCCTGGAGGGCAGAGCTCTTGGGTGGGTCTAAGGGAATCTGAAG
GTTTTGCAAACCGGGGGGCAGTTGGCGATGGGGAGGGTGAGGACAAGCAGGCAAGGCATG
GACCGCCCAGGAGAGGGCGGGGCCTCCCTCGTGCGCATGTGCCTGAACAGTGATTGGCGT
TAGGGAGGATGCTGGAGGCGGAGCTGAGGCGGGTCCCTTCTCATTCTCACCTCCTTCCAG
CATCGGCAGATGCCCACAACAATGACTCCCTTAGGCCCAGACACGTGGCTCCCTCCTGAG
AGGTGGAAGAGCCATTCTCGTTGAGAAAGCTCTGGAGGTGAAATCTCATACAAGTTTCTC
CTTTGCTGTTTCACTTTGAAATGTTGTAGACAGAAAAATAGGCACACGGGGGAAACATGT
CGTGGCATTGGGTGTTTGAGGTGACGAATTCATACACGTCTGGGAAATATTTATCACAAC
CAAAGTTTCTATCCAATGACTCAAGCGACAGTTAAAGCAGAAATCCACGGGCACATCCAT
TTTTGAACACTGAATTAACTTTTTTGGTAACAACTATGTGTTGGTTGCAAGTGGAATGTT
CTCTGTTCTTTTGACTTTTGAGTATCACTTGTTCCAGAATAAATATTGTAAAATGAAGTA
CATGAATGTTTCTTTGTATCCAGAATTAAATAAGAATGAAAATTTGATGTTTAAATTCAA
GGATTAGGAGAGAACTCCGTGTAAATTTGATGTGTAATAATGAGATACAACTTTCTAAAA
AGCATTTGGATGGCAAATTATACATATGGATAAATATTTGAAAAATTTTGTTCTGTTTGG
TTTTCCACTAACTTTTGTGAAACAAAAAAGAATGTAAAAGTCTCTGTCTGGGTTTATTAC
CAATTAACTACTTTCCATGTTGATGCAGGAACAGAACTGGCATTTGGACTTTCTGGAGGA
GTGGAAATACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAAATGAACACAGACACACACACACGGTGTGGAAGGTGACAAGTCTGATGGCTGGAAGG
ACCAAATTCAATAGGACCCTGGAGGGCAGAGCTCTTGGGTGGGTCTAAGGGAATCTGAAG
GTTTTGCAAACCGGGGGGCAGTTGGCGATGGGGAGGGTGAGGACAAGCAGGCAAGGCATG
GACCGCCCAGGAGAGGGCGGGGCCTCCCTCGTGCGCATGTGCCTGAACAGTGATTGGCGT
TAGGGAGGATGCTGGAGGCGGAGCTGAGGCGGGTCCCTTCTCATTCTCACCTCCTTCCAG
CATCGGCAGATGCCCACAACAATGACTCCCTTAGGCCCAGACACGTGGCTCCCTCCTGAG
AGGTGGAAGAGCCATTCTCGTTGAGAAAGCTCTGGAGGTGAAATCTCATACAAGTTTCTC
CTTTGCTGTTTCACTTTGAAATGTTGTAGACAGAAAAATAGGCACACGGGGGAAACATGT
CGTGGCATTGGGTGTTTGAGGTGACGAATTCATACACGTCTGGGAAATATTTATCACAAC
CAAAGTTTCTATCCAATGACTCAAGCGACAGTTAAAGCAGAAATCCACGGGCACATCCAT
TTTTGAACACTGAATTAACTTTTTTGGTAACAACTATGTGTTGGTTGCAAGTGGAATGTT
CTCTGTTCTTTTGACTTTTGAGTATCACTTGTTCCAGAATAAATATTGTAAAATGAAGTA
CATGAATGTTTCTTTGTATCCAGAATTAAATAAGAATGAAAATTTGATGTTTAAATTCAA
GGATTAGGAGAGAACTCCGTGTAAATTTGATGTGTAATAATGAGATACAACTTTCTAAAA
AGCATTTGGATGGCAAATTATACATATGGATAAATATTTGAAAAATTTTGTTCTGTTTGG
TTTTCCACTAACTTTTGTGAAACAAAAAAGAATGTAAAAGTCTCTGTCTGGGTTTATTAC
CAATTAACTACTTTCCATGTTGATGCAGGAACAGAACTGGCATTTGGACTTTCTGGAGGA
GTGGAAATACAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               15-1032, gnl|bosTau2|chr8 (48826699-48825696)
               

               
               15-1032, gnl|Hg17|chr9 (88851886-88850893)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-1032, gnl|bosTau2|chr8 (48826699-48825696)
               

               
               15-1032, gnl|Hg17|chr9 (88851886-88850893)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               fcc (0.197785)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fcc (0.197785)
               

               
               ebs (0.118301)

	15-1032, gnl\|bosTau2\|chr8 (48826699-48825696)
	15-1032, gnl\|Hg17\|chr9 (88851886-88850893)