Non-Coding RNA Search

Ss1.1-rebs04c_j14.5

Sequence:


               
               CTCTTGCGCTGCGCACTGCCGTGCGTTTAACCCAGGCGAGGAGGAGGAGGAGAAAATTCC
CCCAGATCCGGGCAGGCCCCGCACCCCACATCCCGTCCTGTTTTGAGAGGAAAAGGGAAG
AGAAATAAACGTGGCAGCGCGTATAAGTCTGTCTTTAGGATGAAGCCCTAACTGAAGTGA
AGGAAGGAGAGACAGCCCTGAACCTGTGGAGGTCAGTCTGTCTTTTGGGCCCTGCACAAC
TACAGGCCTGGTGGAAAATAGCACACTTGCTCCCGTTCCCATCAGGTCCTGTTTGGCTTG
CAGCCTCTGCAGAACTTGTGAGCCTGAGCTGAAGAGCCTCGCCTTGACGTGAACACACCA
CACTTGAGCACGCCAGCTCCACGCCCTGGATCATAGAATTACTCCAGCTGCGCCATGAGC
AGAGTTCGGGATGCTGGCTGTGTGGCCGCCGGGATAGTGATCGGGGCCAGCGCCTGGTAC
TGTGTCTACAAATATGCCAGGGGAAGAAACCAGATGAAAAAGAGACTAGCCAAGCCCAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCTTGCGCTGCGCACTGCCGTGCGTTTAACCCAGGCGAGGAGGAGGAGGAGAAAATTCC
CCCAGATCCGGGCAGGCCCCGCACCCCACATCCCGTCCTGTTTTGAGAGGAAAAGGGAAG
AGAAATAAACGTGGCAGCGCGTATAAGTCTGTCTTTAGGATGAAGCCCTAACTGAAGTGA
AGGAAGGAGAGACAGCCCTGAACCTGTGGAGGTCAGTCTGTCTTTTGGGCCCTGCACAAC
TACAGGCCTGGTGGAAAATAGCACACTTGCTCCCGTTCCCATCAGGTCCTGTTTGGCTTG
CAGCCTCTGCAGAACTTGTGAGCCTGAGCTGAAGAGCCTCGCCTTGACGTGAACACACCA
CACTTGAGCACGCCAGCTCCACGCCCTGGATCATAGAATTACTCCAGCTGCGCCATGAGC
AGAGTTCGGGATGCTGGCTGTGTGGCCGCCGGGATAGTGATCGGGGCCAGCGCCTGGTAC
TGTGTCTACAAATATGCCAGGGGAAGAAACCAGATGAAAAAGAGACTAGCCAAGCCCAAG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5H9D7_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5H9D7_HUMAN

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               196-539, gnl|bosTau2|chr18 (20276771-20276432)
               

               
               196-539, gnl|Hg17|chrX (100720902-100718595)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               196-539, gnl|bosTau2|chr18 (20276771-20276432)
               

               
               196-539, gnl|Hg17|chrX (100720902-100718595)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               ebs (0.118301)

	196-539, gnl\|bosTau2\|chr18 (20276771-20276432)
	196-539, gnl\|Hg17\|chrX (100720902-100718595)