Non-Coding RNA Search

Ss1.1-rebs04c_m3.5

Sequence:


               
               GTTATGGCACAGATCCTGAAGGATATGGGAATTACGGAGTATGAACCAAGGGTTATAAAT
CAAATGTGGGAATTTGCTTTCCGATATGTGACTTCAATTCTGGATGATGCAAAAATTTAT
TCAAGCCATGCTAAGAAACCTAATGTGGATGCAGATGATGTGAGACTGGCAATCCAGTGT
CGGGCTGACCAATCTTTTACCTCTCCTCCCCCGAGAGATTTTTTACTGGATATTGCAAGG
CAGAAAAATCAAACCCCTTTACCACTGATTAAGCCATATGCAGGACCCAGATTGCCACCT
GACAGATACTGCTTAACAGCTCCAAATTATAGGCTGAAGTCCTTAATTAAAAAGGGACCT
AACCAAGGAAGACTAGTTCCACGGTTAAGTGTTGGTGCTGTTAGTAGCAGACCTACCACT
CCTACTATAGCAACCTCACAAACAGTGTCTGTCCCAAATAAAGTTGCACCTGCAGTGTCA
GTGACCAGCCAAAGATTTACGGAGCATATTCCACCTTCTCAGTCCACACCTGTCAAACCA
TGTATACAAAAGGCCACAATGGCTTGGCCAATCTTGGCATACGCAACAAAGTTGTCAGCA
GTGACAAAGTCAACAGGCACAGTAATCGTGACACCGTTCATCAAAGCTTTGGACATCAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTATGGCACAGATCCTGAAGGATATGGGAATTACGGAGTATGAACCAAGGGTTATAAAT
CAAATGTGGGAATTTGCTTTCCGATATGTGACTTCAATTCTGGATGATGCAAAAATTTAT
TCAAGCCATGCTAAGAAACCTAATGTGGATGCAGATGATGTGAGACTGGCAATCCAGTGT
CGGGCTGACCAATCTTTTACCTCTCCTCCCCCGAGAGATTTTTTACTGGATATTGCAAGG
CAGAAAAATCAAACCCCTTTACCACTGATTAAGCCATATGCAGGACCCAGATTGCCACCT
GACAGATACTGCTTAACAGCTCCAAATTATAGGCTGAAGTCCTTAATTAAAAAGGGACCT
AACCAAGGAAGACTAGTTCCACGGTTAAGTGTTGGTGCTGTTAGTAGCAGACCTACCACT
CCTACTATAGCAACCTCACAAACAGTGTCTGTCCCAAATAAAGTTGCACCTGCAGTGTCA
GTGACCAGCCAAAGATTTACGGAGCATATTCCACCTTCTCAGTCCACACCTGTCAAACCA
TGTATACAAAAGGCCACAATGGCTTGGCCAATCTTGGCATACGCAACAAAGTTGTCAGCA
GTGACAAAGTCAACAGGCACAGTAATCGTGACACCGTTCATCAAAGCTTTGGACATCAGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61873462|ref|XP_613225.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61873462|ref|XP_613225.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-537, gnl|bosTau2|chr15 (48311764-48311219)
               

               
               4-537, gnl|Hg17|chr5 (68697266-68696721)
               

               
               4-537, gnl|Mm7|chr6 (115664719-115664174)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-537, gnl|bosTau2|chr15 (48311764-48311219)
               

               
               4-537, gnl|Hg17|chr5 (68697266-68696721)
               

               
               4-537, gnl|Mm7|chr6 (115664719-115664174)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               sug (0.127291)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sug (0.127291)
               

               
               ebs (0.118301)

	4-537, gnl\|bosTau2\|chr15 (48311764-48311219)
	4-537, gnl\|Hg17\|chr5 (68697266-68696721)
	4-537, gnl\|Mm7\|chr6 (115664719-115664174)