Non-Coding RNA Search

Ss1.1-rebs04c_p6.5

Sequence:


               
               TGCGATAGCCTTAAGAGGAAAAAAGCTTTAACATAAGTGGGAAAAACTTCCCTAAGTCCA
GTGCATCTGCATGTCCTTATCCCCTCCTCCTCACCTGAGGCCTTGTGGAGATTGATCATC
AAATGCAACTTTGATGAACCAAGCCAGGTAAATGACTGCTGTTGCGCTTTTCGTGACTTC
CTTTCCTTTGGTCCTGGCACAGTTGTCTGCAGTACTAGATGTGTTTTACGCATCAACCAA
TGTTTACACACGTATGTGCAGCTTGTGTGGGGAGAAAGACAAAATATGCATATTCTCTGA
ATTCGTGCCTGTTACTCTTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------CTCTCTTTTCTAATCTCTGAGGTA
ACCACTTAACCTAGACAAGGTGGACATGGGGTGGGACCCAGAGAAGTGGCTTGCATTACA
GATGTATGTATTAAGTTCCATTTTGCCTTTCCAAATAAAATTGTTTCTTTCTGGTCTCAA
GTCAGATGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCGATAGCCTTAAGAGGAAAAAAGCTTTAACATAAGTGGGAAAAACTTCCCTAAGTCCA
GTGCATCTGCATGTCCTTATCCCCTCCTCCTCACCTGAGGCCTTGTGGAGATTGATCATC
AAATGCAACTTTGATGAACCAAGCCAGGTAAATGACTGCTGTTGCGCTTTTCGTGACTTC
CTTTCCTTTGGTCCTGGCACAGTTGTCTGCAGTACTAGATGTGTTTTACGCATCAACCAA
TGTTTACACACGTATGTGCAGCTTGTGTGGGGAGAAAGACAAAATATGCATATTCTCTGA
ATTCGTGCCTGTTACTCTTTTTTT------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------CTCTCTTTTCTAATCTCTGAGGTA
ACCACTTAACCTAGACAAGGTGGACATGGGGTGGGACCCAGAGAAGTGGCTTGCATTACA
GATGTATGTATTAAGTTCCATTTTGCCTTTCCAAATAAAATTGTTTCTTTCTGGTCTCAA
GTCAGATGTCTC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               42-479, gnl|bosTau2|chr25 (18769904-18769451)
               

               
               42-479, gnl|Hg17|chr16 (22206526-22207578)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               42-479, gnl|bosTau2|chr25 (18769904-18769451)
               

               
               42-479, gnl|Hg17|chr16 (22206526-22207578)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cov (0.132153)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cov (0.132153)
               

               
               ebs (0.118301)

	42-479, gnl\|bosTau2\|chr25 (18769904-18769451)
	42-479, gnl\|Hg17\|chr16 (22206526-22207578)