Non-Coding RNA Search

Ss1.1-rebs05c_e3.5

Sequence:


               
               TGGGCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGGGCGGGGCGGCACGTG
GGGAGGCCATCGAGACAGACGACACGATGGGTGGGATCCCCGCCGTGAATGGCCGAGGGG
AGCGGCTGCTGCTACACATCGGCATCATTGACATCCTGCAGTCCTACAGGTTCATCAAGA
AGTTAGAACACACCTGGAAGGCTCTCGTCCATGATGGGGACACTGTCTCTGTCCACCGGC
CCAGCTTCTACGCCGAGCGCTTCTTCAAGTTCATGAGCAACACGGTTTTCCGGAAGAATT
CCTCCCTGAAGTCGTCGCCGTCCAAGAAGGGCCGTGGTGCCTTGCTGGCTGTCAAGCCCC
TGGGGCCCACTGCCGCCTTCTCGGCTAGCCAGATCCCCAGCGAGCGGGAGGACGCACAGT
ATGACCTGCGGGGAGCCCGCAGCTACCCCACATTGGAGGACGAAGGCCGGCCGGACCTCC
TGCCCTGCACACCACCCTCTTTTGAGGAGGCCACCACCGCCTCCATTGCCACGACCCTGT
CCTCCACATCCCTCTCCATCCCTGAGCGGTCCCCTTCAAAGACTTCAGAGCAGCCTCGGT
ACAGGCGGCACACACAGTCCTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGCCAGAAGGCGCTCTACTCCACGGCCATGGAGTCCATCCAGGGCGGGGCGGCACGTG
GGGAGGCCATCGAGACAGACGACACGATGGGTGGGATCCCCGCCGTGAATGGCCGAGGGG
AGCGGCTGCTGCTACACATCGGCATCATTGACATCCTGCAGTCCTACAGGTTCATCAAGA
AGTTAGAACACACCTGGAAGGCTCTCGTCCATGATGGGGACACTGTCTCTGTCCACCGGC
CCAGCTTCTACGCCGAGCGCTTCTTCAAGTTCATGAGCAACACGGTTTTCCGGAAGAATT
CCTCCCTGAAGTCGTCGCCGTCCAAGAAGGGCCGTGGTGCCTTGCTGGCTGTCAAGCCCC
TGGGGCCCACTGCCGCCTTCTCGGCTAGCCAGATCCCCAGCGAGCGGGAGGACGCACAGT
ATGACCTGCGGGGAGCCCGCAGCTACCCCACATTGGAGGACGAAGGCCGGCCGGACCTCC
TGCCCTGCACACCACCCTCTTTTGAGGAGGCCACCACCGCCTCCATTGCCACGACCCTGT
CCTCCACATCCCTCTCCATCCCTGAGCGGTCCCCTTCAAAGACTTCAGAGCAGCCTCGGT
ACAGGCGGCACACACAGTCCTCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               304-466, gnl|bosTau2|chr7 (17061458-17061296)
               

               
               304-466, gnl|Hg17|chr19 (3595249-3595084)
               

               
               304-466, gnl|Mm7|chr10 (81104905-81105067)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               304-466, gnl|bosTau2|chr7 (17061458-17061296)
               

               
               304-466, gnl|Hg17|chr19 (3595249-3595084)
               

               
               304-466, gnl|Mm7|chr10 (81104905-81105067)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ebs (0.236602)
               

               
               ecc (0.23007)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.236602)
               

               
               ecc (0.23007)
               

               
               eje (0.0988338)

	304-466, gnl\|bosTau2\|chr7 (17061458-17061296)
	304-466, gnl\|Hg17\|chr19 (3595249-3595084)
	304-466, gnl\|Mm7\|chr10 (81104905-81105067)