Non-Coding RNA Search

Ss1.1-rebs07c_i16.5

Sequence:


               
               GGAATATCCTGTGAGCATCATCTTCTTTATTCAGCAACATTAAGAGCATCTCCAGTGGGT
TCACATATATTTTTTTGAGTGTCTGTTTTCTGTTAATCATGGTGAGAACATTAAGAATAA
TTTTAGAAATTGGAAACATTCTTAACTCTGAGAGATCATTACTTTGCTCTGCTGTGGTTA
CAAATACAGTAAGTTCAACATAAACACAGCTTAAGAAGTGTCTCAACCACTTCAGAAATG
TAGAAGTATTTTTTATAATCTAGAGTATTTAATTAATCAAAACTTCTATTCCCCTAGTAT
TCTGAGTAATCAATATTTTCATTTGTGAGTTTCAGATGAAGAATTATTTGCACAATGACA
TATCTGGGTTTTTTAATACACCTTCTTCTGAATCTTTCTTTAGTGTGATGTGAGGTATAC
ATGAGAAGTGTGCATTTAAATAGTCACAGTAATGATTGTAATGAATTCCAAGTGAGGACC
GCATGCTCTAATTCCCATGAATTGAGGGGTAATATTTTTATGTTATCGTTTTCTATAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAATATCCTGTGAGCATCATCTTCTTTATTCAGCAACATTAAGAGCATCTCCAGTGGGT
TCACATATATTTTTTTGAGTGTCTGTTTTCTGTTAATCATGGTGAGAACATTAAGAATAA
TTTTAGAAATTGGAAACATTCTTAACTCTGAGAGATCATTACTTTGCTCTGCTGTGGTTA
CAAATACAGTAAGTTCAACATAAACACAGCTTAAGAAGTGTCTCAACCACTTCAGAAATG
TAGAAGTATTTTTTATAATCTAGAGTATTTAATTAATCAAAACTTCTATTCCCCTAGTAT
TCTGAGTAATCAATATTTTCATTTGTGAGTTTCAGATGAAGAATTATTTGCACAATGACA
TATCTGGGTTTTTTAATACACCTTCTTCTGAATCTTTCTTTAGTGTGATGTGAGGTATAC
ATGAGAAGTGTGCATTTAAATAGTCACAGTAATGATTGTAATGAATTCCAAGTGAGGACC
GCATGCTCTAATTCCCATGAATTGAGGGGTAATATTTTTATGTTATCGTTTTCTATAATA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               21-540, gnl|bosTau2|chr6 (49972470-49971948)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-540, gnl|bosTau2|chr6 (49972470-49971948)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               lin (0.145603)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lin (0.145603)
               

               
               ebs (0.118301)