Ss1.1-rebs08c_a22.5
|
CCCGCCCACACCCCGCCGTACCTGCACGGCTGAACGGGAGAGGAACAAGCTCTGCTCCAC
CGCAAGGCAAAAGGCAAATACCCTTCACGCAACTGCGTCCGCACACACGCGTGCTCCGTC
GCCGGGCTATATAACCGAGACTCAGACTAACTTGTTGCGGCCAAGTCGGGCAGGCTAGTG
GCCAATCCCGACGGCGTCCTCTGAGCTCTTCGCGCAGCAATTGGGTACTGACTCAGGATG
AAGGCGTGGCTCTTGATTGGCTTTGACTTTTGCCTACAACCGCGCCAGCGCTCAGAGCCG
CGGGAGGCGTCGCCACGGCCACCACGTCCTCAGTCATGCCGAAGCACGAGTTCTCCGTGG
ACATGACCTGTGAGGGCTGCTCTAACGCAGTCACTCGGGTCCTCAACAAGCTGGGAGGAG
TTCAGTTTGACATTGACCTGCCCAACAAGAAGGTCTGCATTGACTCTGAGCACAGCGTGG
ACACTCTGCTGGAGACCCTGGGGAAAACAGGAAAGGCCGTTTCCTACCTCGGCCCCAAGT
AGTGAGGGCTCGGGCCCCTGGCCTGCAGGATGGACCAAAGTGGGCAGGATGCTGATCTGC
CTTCCAGACAGATGTAAGGCCTGGCAGTCCTGCTCAACGACGGGAATTCCTGTGGAGACC
CTCACTTCCCCTGCTCCTCTGTAGCTTCCCTCTAATAAAGTCAAGCTGCTTTTGCTGGAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCGCCCACACCCCGCCGTACCTGCACGGCTGAACGGGAGAGGAACAAGCTCTGCTCCAC
CGCAAGGCAAAAGGCAAATACCCTTCACGCAACTGCGTCCGCACACACGCGTGCTCCGTC
GCCGGGCTATATAACCGAGACTCAGACTAACTTGTTGCGGCCAAGTCGGGCAGGCTAGTG
GCCAATCCCGACGGCGTCCTCTGAGCTCTTCGCGCAGCAATTGGGTACTGACTCAGGATG
AAGGCGTGGCTCTTGATTGGCTTTGACTTTTGCCTACAACCGCGCCAGCGCTCAGAGCCG
CGGGAGGCGTCGCCACGGCCACCACGTCCTCAGTCATGCCGAAGCACGAGTTCTCCGTGG
ACATGACCTGTGAGGGCTGCTCTAACGCAGTCACTCGGGTCCTCAACAAGCTGGGAGGAG
TTCAGTTTGACATTGACCTGCCCAACAAGAAGGTCTGCATTGACTCTGAGCACAGCGTGG
ACACTCTGCTGGAGACCCTGGGGAAAACAGGAAAGGCCGTTTCCTACCTCGGCCCCAAGT
AGTGAGGGCTCGGGCCCCTGGCCTGCAGGATGGACCAAAGTGGGCAGGATGCTGATCTGC
CTTCCAGACAGATGTAAGGCCTGGCAGTCCTGCTCAACGACGGGAATTCCTGTGGAGACC
CTCACTTCCCCTGCTCCTCTGTAGCTTCCCTCTAATAAAGTCAAGCTGCTTTTGCTGGAA
AAAAAAAAAAAAAAAAAAAAAAAA
|
|
1-276, gnl|bosTau2|chr7 (43572246-43571969) |
|
1-276, gnl|canFam2|chr4 (60789147-60788644) |
|
1-276, gnl|dasNov1|scaffold_121114 (5065-4562) |
|
1-276, gnl|echTel1|scaffold_319513 (3252-3754) |
|
1-276, gnl|hg17|chr5 (151131218-151131722) |
|
1-276, gnl|Hg17|chr5 (151131811-151131535) |
|
1-276, gnl|loxAfr1|scaffold_135174 (5068-5571) |
|
1-276, gnl|mm7|chr11 (55426018-55426497) |
|
1-276, gnl|Mm7|chr11 (55426579-55426325) |
|
1-276, gnl|monDom2|scaffold_6 (54561089-54560587) |
|
1-276, gnl|oryCun1|scaffold_191969 (183263-182760) |
|
1-276, gnl|panTro1|chr4 (158079263-158079767) |
|
1-276, gnl|rheMac2|chr6 (148214612-148215115) |
|
1-276, gnl|rn3|chr10 (40893354-40893830) |
| |
|
416-588, gnl|bosTau2|chr7 (43497041-43496870) |
|
416-588, gnl|Hg17|chr5 (151106205-151106032) |
|
416-588, gnl|Mm7|chr11 (55407384-55407213) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-276, gnl|bosTau2|chr7 (43572246-43571969) |
|
1-276, gnl|canFam2|chr4 (60789147-60788644) |
|
1-276, gnl|dasNov1|scaffold_121114 (5065-4562) |
|
1-276, gnl|echTel1|scaffold_319513 (3252-3754) |
|
1-276, gnl|hg17|chr5 (151131218-151131722) |
|
1-276, gnl|Hg17|chr5 (151131811-151131535) |
|
1-276, gnl|loxAfr1|scaffold_135174 (5068-5571) |
|
1-276, gnl|mm7|chr11 (55426018-55426497) |
|
1-276, gnl|Mm7|chr11 (55426579-55426325) |
|
1-276, gnl|monDom2|scaffold_6 (54561089-54560587) |
|
1-276, gnl|oryCun1|scaffold_191969 (183263-182760) |
|
1-276, gnl|panTro1|chr4 (158079263-158079767) |
|
1-276, gnl|rheMac2|chr6 (148214612-148215115) |
|
1-276, gnl|rn3|chr10 (40893354-40893830) |
| |
|
416-588, gnl|bosTau2|chr7 (43497041-43496870) |
|
416-588, gnl|Hg17|chr5 (151106205-151106032) |
|
416-588, gnl|Mm7|chr11 (55407384-55407213) |
|
cli (0.764059) |
|
jej (0.692452) |
|
tes (0.623441) |
|
cag (0.604778) |
|
eje (0.593003) |
|
pty (0.570858) |
|
ill (0.526778) |
|
duo (0.518403) |
|
mcp (0.511945) |
|
cje (0.495704) |
|
ebs (0.473205) |
|
cov (0.396458) |
|
col (0.390016) |
|
elu (0.385356) |
|
fhi (0.339155) |
|
nbm (0.297974) |
|
lnt (0.284616) |
|
ese (0.253004) |
|
eep (0.245128) |
|
cly (0.241284) |
|
ece (0.229305) |
|
jca (0.22792) |
|
fty (0.17584) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cki (0.165235) |
|
nco (0.161734) |
|
eli (0.151814) |
|
nca (0.136874) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ova (0.129132) |
|
med (0.116252) |
|
ecc (0.115035) |
|
cli (0.764059) |
|
jej (0.692452) |
|
tes (0.623441) |
|
cag (0.604778) |
|
eje (0.593003) |
|
pty (0.570858) |
|
ill (0.526778) |
|
duo (0.518403) |
|
mcp (0.511945) |
|
cje (0.495704) |
|
ebs (0.473205) |
|
cov (0.396458) |
|
col (0.390016) |
|
elu (0.385356) |
|
fhi (0.339155) |
|
nbm (0.297974) |
|
lnt (0.284616) |
|
ese (0.253004) |
|
eep (0.245128) |
|
cly (0.241284) |
|
ece (0.229305) |
|
jca (0.22792) |
|
fty (0.17584) |
|
ton (0.1755) |
|
fbs (0.175346) |
|
eye (0.170503) |
|
nje (0.16592) |
|
cki (0.165235) |
|
nco (0.161734) |
|
eli (0.151814) |
|
nca (0.136874) |
|
pla (0.133672) |
|
nmm (0.132802) |
|
ova (0.129132) |
|
med (0.116252) |
|
ecc (0.115035) |
