Ss1.1-rebs08c_h11.5
|
CAACAAGTTTACATTGATTGGGGACAATGCCTTCACGGGACTGTCGCACCTGCAGTACCT
CTTCATTGAGAACAATGACATCTGGGCACTCTCCAAGTTTACTTTCAGAGGACTCAAGTC
TTTAACCCACCTCTCACTGGCCAACAATAACCTGCAGACGCTGCCTCGAGACATCTTTCG
GCCCCTGGACATCCTGAGTGACCTGGACCTGCGGGGCAACTCACTCAACTGCGACTGCAA
GGTGAAATGGCTGGTGGAGTGGCTGGCACATACCAACACCACGGTGGCGCCCATCTACTG
CGCCAGCCCGCCTCGCTTCCAAGAACACAAGGTGCAGGATCTGCCGCTGCGGGAGTTCGA
CTGCATTACCACGGATTTCGTGCTGTACCAGACCCTGTCCTTCCCAGCAGTGTCTGCCGA
GCCCTTCCTTTACTCCAGTGACCTCTATTTGGCTCTGGCCCAGCCGGGAGCCAGCGCTTG
CACCATCCTCAAGTGGGACTATGTTGAAAGGCAGCTTCGAGACTATGATAGAATCCCAGC
CCCCTCTGCGGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAACAAGTTTACATTGATTGGGGACAATGCCTTCACGGGACTGTCGCACCTGCAGTACCT
CTTCATTGAGAACAATGACATCTGGGCACTCTCCAAGTTTACTTTCAGAGGACTCAAGTC
TTTAACCCACCTCTCACTGGCCAACAATAACCTGCAGACGCTGCCTCGAGACATCTTTCG
GCCCCTGGACATCCTGAGTGACCTGGACCTGCGGGGCAACTCACTCAACTGCGACTGCAA
GGTGAAATGGCTGGTGGAGTGGCTGGCACATACCAACACCACGGTGGCGCCCATCTACTG
CGCCAGCCCGCCTCGCTTCCAAGAACACAAGGTGCAGGATCTGCCGCTGCGGGAGTTCGA
CTGCATTACCACGGATTTCGTGCTGTACCAGACCCTGTCCTTCCCAGCAGTGTCTGCCGA
GCCCTTCCTTTACTCCAGTGACCTCTATTTGGCTCTGGCCCAGCCGGGAGCCAGCGCTTG
CACCATCCTCAAGTGGGACTATGTTGAAAGGCAGCTTCGAGACTATGATAGAATCCCAGC
CCCCTCTGCGGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
374-539, gnl|bosTau2|chr8 (31431556-31431721) |
|
374-539, gnl|canFam2|chr1 (120358487-120358376) |
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374-539, gnl|danRer3|chrNA (101664005-101663940) |
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374-539, gnl|echTel1|scaffold_206152 (6731-6842) |
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374-539, gnl|fr1|chrUn (90564768-90564657) |
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374-539, gnl|hg17|chr19 (40309636-40309747) |
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374-539, gnl|Hg17|chr8 (22065112-22064947) |
|
374-539, gnl|loxAfr1|scaffold_49031 (6233-6344) |
|
374-539, gnl|Mm7|chr14 (65179164-65179329) |
|
374-539, gnl|mm7|chr7 (28007002-28006891) |
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374-539, gnl|monDom2|scaffold_139 (1425939-1426050) |
|
374-539, gnl|oryCun1|scaffold_192384 (11249-11345) |
|
374-539, gnl|panTro1|chr20 (36896297-36896408) |
|
374-539, gnl|rheMac2|chr19 (41620660-41620770) |
|
374-539, gnl|rn3|chr1 (86188395-86188284) |
|
374-539, gnl|xenTro1|scaffold_194 (980346-980441) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
374-539, gnl|bosTau2|chr8 (31431556-31431721) |
|
374-539, gnl|canFam2|chr1 (120358487-120358376) |
|
374-539, gnl|danRer3|chrNA (101664005-101663940) |
|
374-539, gnl|echTel1|scaffold_206152 (6731-6842) |
|
374-539, gnl|fr1|chrUn (90564768-90564657) |
|
374-539, gnl|hg17|chr19 (40309636-40309747) |
|
374-539, gnl|Hg17|chr8 (22065112-22064947) |
|
374-539, gnl|loxAfr1|scaffold_49031 (6233-6344) |
|
374-539, gnl|Mm7|chr14 (65179164-65179329) |
|
374-539, gnl|mm7|chr7 (28007002-28006891) |
|
374-539, gnl|monDom2|scaffold_139 (1425939-1426050) |
|
374-539, gnl|oryCun1|scaffold_192384 (11249-11345) |
|
374-539, gnl|panTro1|chr20 (36896297-36896408) |
|
374-539, gnl|rheMac2|chr19 (41620660-41620770) |
|
374-539, gnl|rn3|chr1 (86188395-86188284) |
|
374-539, gnl|xenTro1|scaffold_194 (980346-980441) |
