Ss1.1-rebs10c_a18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCGACCAGGAGTCAGAGGACGACCTCAGCGCCTCGCGCACCTCGCTGGAGCGCCAGGCC CCGCACCGCGGCAACACCATGGTGCACGTGTGCTGGCACCGCAACACCAGCGTCTCGATG GTGGACTTCAGCGTGGCGGTCGAGAATCAGCTGTCTGGGAACCTGCTGCGGAAATTCAAA AACAGCAACGGGTGGCAGAAGCTGTGGGTGGTGTTCACCAACTTCTGCCTGTTCTTCTAC AAATCCCCCCAGGACAATCACCCCCTGGCCAGCCTGCCTCTACTCGGGTACTCGCTCACC GTCCCCTCGGAGGCCGAGGACATCCACAAGGACTACGTGTTCAAGCTGCATTTCAAGTCC CACGTGTATTACTTCAGGGCCGAGAGCGAATACACGTTTGAAAGGTGGATGGAGGTGATC CGAAGTGCCACCAGCTCGGCCTCCCGCGCTCATGTGCTGAGCCACAAAGAATCGCACGTG TACTGATGGCAGCACACACCTGTTGATGGGTTTCAGCAGTGGCGACTTTCCCGAAGGCAC TTCCTTTCTTCTGTATTCATGAAGCCTAGTAAACTTAACACCTGTCTGGAAAACCAACCA ACCAACAACCCATGGCTGCGCAGCAACTCTCATCTGTCTCCACAGAACGTTTTTAATNTT GTCTTTTCAGCTAATTTTTCACCTGAACAGGACCGCCGCCCCCACCAGGCGGGTCGCGCT CTTGGTGGGCCGTCCTCGGCTTGTGCCAGTNTTAAAACACTGTCATTAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCGACCAGGAGTCAGAGGACGACCTCAGCGCCTCGCGCACCTCGCTGGAGCGCCAGGCC CCGCACCGCGGCAACACCATGGTGCACGTGTGCTGGCACCGCAACACCAGCGTCTCGATG GTGGACTTCAGCGTGGCGGTCGAGAATCAGCTGTCTGGGAACCTGCTGCGGAAATTCAAA AACAGCAACGGGTGGCAGAAGCTGTGGGTGGTGTTCACCAACTTCTGCCTGTTCTTCTAC AAATCCCCCCAGGACAATCACCCCCTGGCCAGCCTGCCTCTACTCGGGTACTCGCTCACC GTCCCCTCGGAGGCCGAGGACATCCACAAGGACTACGTGTTCAAGCTGCATTTCAAGTCC CACGTGTATTACTTCAGGGCCGAGAGCGAATACACGTTTGAAAGGTGGATGGAGGTGATC CGAAGTGCCACCAGCTCGGCCTCCCGCGCTCATGTGCTGAGCCACAAAGAATCGCACGTG TACTGATGGCAGCACACACCTGTTGATGGGTTTCAGCAGTGGCGACTTTCCCGAAGGCAC TTCCTTTCTTCTGTATTCATGAAGCCTAGTAAACTTAACACCTGTCTGGAAAACCAACCA ACCAACAACCCATGGCTGCGCAGCAACTCTCATCTGTCTCCACAGAACGTTTTTAATNTT GTCTTTTCAGCTAATTTTTCACCTGAACAGGACCGCCGCCCCCACCAGGCGGGTCGCGCT CTTGGTGGGCCGTCCTCGGCTTGTGCCAGTNTTAAAACACTGTCATTAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 3-144, gnl|bosTau2|chr12 (44336534-44336393) | |
| 3-144, gnl|canFam2|chr22 (51516020-51516141) | |
| 3-144, gnl|danRer3|chr21 (32828481-32828363) | |
| 3-144, gnl|echTel1|scaffold_278440 (84882-85003) | |
| 3-144, gnl|fr1|chrUn (95551781-95551663) | |
| 3-144, gnl|galGal2|chr1 (137554457-137554339) | |
| 3-144, gnl|hg17|chr13 (97890924-97891045) | |
| 3-144, gnl|Hg17|chr13 (97890950-97891091) | |
| 3-144, gnl|mm7|chr14 (115681289-115681410) | |
| 3-144, gnl|Mm7|chr14 (115681315-115681456) | |
| 3-144, gnl|monDom2|scaffold_11 (54170339-54170221) | |
| 3-144, gnl|oryCun1|scaffold_214863 (42308-42434) | |
| 3-144, gnl|panTro1|chr14 (81114536-81114657) | |
| 3-144, gnl|rheMac2|chr17 (78817747-78817868) | |
| 3-144, gnl|rn3|chr15 (106262371-106262492) | |
| 3-144, gnl|tetNig1|chr2 (10819878-10819996) | |
| 3-144, gnl|xenTro1|scaffold_128 (1810485-1810603) | |
| 249-398, gnl|bosTau2|chr16 (44015143-44014994) | |
| 249-398, gnl|Hg17|chr2 (242152694-242152843) | |
| 249-398, gnl|Mm7|chr1 (93528298-93528447) | |
| 403-766, gnl|bosTau2|chr12 (44307876-44307508) | |
| 403-766, gnl|Hg17|chr13 (97898489-97898827) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-144, gnl|bosTau2|chr12 (44336534-44336393) | |
| 3-144, gnl|canFam2|chr22 (51516020-51516141) | |
| 3-144, gnl|danRer3|chr21 (32828481-32828363) | |
| 3-144, gnl|echTel1|scaffold_278440 (84882-85003) | |
| 3-144, gnl|fr1|chrUn (95551781-95551663) | |
| 3-144, gnl|galGal2|chr1 (137554457-137554339) | |
| 3-144, gnl|hg17|chr13 (97890924-97891045) | |
| 3-144, gnl|Hg17|chr13 (97890950-97891091) | |
| 3-144, gnl|mm7|chr14 (115681289-115681410) | |
| 3-144, gnl|Mm7|chr14 (115681315-115681456) | |
| 3-144, gnl|monDom2|scaffold_11 (54170339-54170221) | |
| 3-144, gnl|oryCun1|scaffold_214863 (42308-42434) | |
| 3-144, gnl|panTro1|chr14 (81114536-81114657) | |
| 3-144, gnl|rheMac2|chr17 (78817747-78817868) | |
| 3-144, gnl|rn3|chr15 (106262371-106262492) | |
| 3-144, gnl|tetNig1|chr2 (10819878-10819996) | |
| 3-144, gnl|xenTro1|scaffold_128 (1810485-1810603) | |
| 249-398, gnl|bosTau2|chr16 (44015143-44014994) | |
| 249-398, gnl|Hg17|chr2 (242152694-242152843) | |
| 249-398, gnl|Mm7|chr1 (93528298-93528447) | |
| 403-766, gnl|bosTau2|chr12 (44307876-44307508) | |
| 403-766, gnl|Hg17|chr13 (97898489-97898827) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| clu (0.358938) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| ebs (0.118301) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| clu (0.358938) | |
| eru (0.120048) | |
| pgl (0.118483) | |
| ebs (0.118301) |