Non-Coding RNA Search

Ss1.1-rebs11c_m19.5

Sequence:


               
               ACACACCTTCCGGGGCGTGCAGCCGCTGCCGCCGAGGCTTCGACGAAGAGCGCATTGGAA
GCATCCCTCTCTACCTGCCGACATCCTGCCTTTGAGGACTTGTGGCCAAGGTGTGGCTGT
GGAAAGCTGGCCAGGGAGGGACACTGCTCAGCTGCTGCTCTGCTCCTGTCTCCCATCCCC
TCCCCTGGCCATGACAGAGACCCGTGAGCCTGCTGAGACTGGGGGCTACGCCAGCTTGGA
AGAAGATGATGAGGACCTCTCTCCAGGCCCCGAGCATTCCTCTGACTCCGAATACACTCT
CTCTGAGCCGGACTCCGAAGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGACCACTGA
TGATCCTGAATATGACCCTGGCTACAAGGTGAAGCAGCGCCTGGGGGGGGGCCGGGGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACACCTTCCGGGGCGTGCAGCCGCTGCCGCCGAGGCTTCGACGAAGAGCGCATTGGAA
GCATCCCTCTCTACCTGCCGACATCCTGCCTTTGAGGACTTGTGGCCAAGGTGTGGCTGT
GGAAAGCTGGCCAGGGAGGGACACTGCTCAGCTGCTGCTCTGCTCCTGTCTCCCATCCCC
TCCCCTGGCCATGACAGAGACCCGTGAGCCTGCTGAGACTGGGGGCTACGCCAGCTTGGA
AGAAGATGATGAGGACCTCTCTCCAGGCCCCGAGCATTCCTCTGACTCCGAATACACTCT
CTCTGAGCCGGACTCCGAAGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGACCACTGA
TGATCCTGAATATGACCCTGGCTACAAGGTGAAGCAGCGCCTGGGGGGGGGCCGGGGGGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|32765857|gb|AAP87382.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|32765857|gb|AAP87382.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-267, gnl|bosTau2|chr18 (46219738-46219944)
               

               
               60-267, gnl|Hg17|chr19 (48810428-48810220)
               

               
               60-267, gnl|Mm7|chr7 (21298097-21298307)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-267, gnl|bosTau2|chr18 (46219738-46219944)
               

               
               60-267, gnl|Hg17|chr19 (48810428-48810220)
               

               
               60-267, gnl|Mm7|chr7 (21298097-21298307)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               ebs (0.236602)
               

               
               tes (0.207814)
               

               
               sug (0.127291)
               

               
               eep (0.122564)
               

               
               jca (0.11396)
               

               
               eje (0.0988338)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.236602)
               

               
               tes (0.207814)
               

               
               sug (0.127291)
               

               
               eep (0.122564)
               

               
               jca (0.11396)
               

               
               eje (0.0988338)

	60-267, gnl\|bosTau2\|chr18 (46219738-46219944)
	60-267, gnl\|Hg17\|chr19 (48810428-48810220)
	60-267, gnl\|Mm7\|chr7 (21298097-21298307)

	ebs (0.236602)
	tes (0.207814)
	sug (0.127291)
	eep (0.122564)
	jca (0.11396)
	eje (0.0988338)