Non-Coding RNA Search

Ss1.1-rebs13c_d19.5

Sequence:


               
               GCGATGCCTGGCTGCTTTTTAGCCAATGCCACGTGAAGCTCTAAGTGGGTTGGAGGGTTG
AGGCAACTTTTCCTGCCAACTCCCATGAGCTGGCACTGTGGAGAAACCCACCATGCCAAT
ACAGAAAGCCCACAAGGGTTTTCAAATAAGTGTCACTGCCCAGTAGATAAGAGATTTCCG
TTTGAAGTACTTCCTTACCCCAGAGTTTAAAAAGAAAAAGAAAGGAGGAGATCCCACCTT
TGCCCCCCCCCACCCTCCCCGGAGCAAATGCAGCTCCTTCAGCTCAAGGAATGCTGTGTT
TTTGCCTTTCCCTTCTGCCTCCGTCCGCATCTGTCTGCTTCTGCACCTGGGTGGGACCAT
TGCAAGCAGGGAAAGAAAAGCCAGACAGATGAAGGCAGTAGGACACAAAGCATCCTAACT
GGCTTCTCTTTCGTGACTTGGTTTTGCAGCTTCCAACTAGTTCAGACCGCCACCTCCTGG
AAAATATCCCACATGTCAGAAAAGTGAAGTCCTAGCGTCTTAAGGGATATTTTCTTAGGT
TTAAGTTTGTCCCTAACTGTGCCTTGTGATAAGAAAACTGCCATGTTTTATCAGCAGTTT
TAGTCCAGAGACAATCTGAGTCTGCCACCAGGGCCCTTTAGAAACAGTACAATGAGTAAA
AGGGAATTTGATTTTCATCTTGGCACTGAATTGTCCCCGTTGAAATGAGTGATCTTCTGT
TGTGGGAATGAGTTATAATCAGTATTCATCTCTATTTTTGTCACTGTTCTAATTGTGTCA
TTTGTATCGTTTGAAAATATTTCTTCTTTAAAATTAAACTAACCTGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGATGCCTGGCTGCTTTTTAGCCAATGCCACGTGAAGCTCTAAGTGGGTTGGAGGGTTG
AGGCAACTTTTCCTGCCAACTCCCATGAGCTGGCACTGTGGAGAAACCCACCATGCCAAT
ACAGAAAGCCCACAAGGGTTTTCAAATAAGTGTCACTGCCCAGTAGATAAGAGATTTCCG
TTTGAAGTACTTCCTTACCCCAGAGTTTAAAAAGAAAAAGAAAGGAGGAGATCCCACCTT
TGCCCCCCCCCACCCTCCCCGGAGCAAATGCAGCTCCTTCAGCTCAAGGAATGCTGTGTT
TTTGCCTTTCCCTTCTGCCTCCGTCCGCATCTGTCTGCTTCTGCACCTGGGTGGGACCAT
TGCAAGCAGGGAAAGAAAAGCCAGACAGATGAAGGCAGTAGGACACAAAGCATCCTAACT
GGCTTCTCTTTCGTGACTTGGTTTTGCAGCTTCCAACTAGTTCAGACCGCCACCTCCTGG
AAAATATCCCACATGTCAGAAAAGTGAAGTCCTAGCGTCTTAAGGGATATTTTCTTAGGT
TTAAGTTTGTCCCTAACTGTGCCTTGTGATAAGAAAACTGCCATGTTTTATCAGCAGTTT
TAGTCCAGAGACAATCTGAGTCTGCCACCAGGGCCCTTTAGAAACAGTACAATGAGTAAA
AGGGAATTTGATTTTCATCTTGGCACTGAATTGTCCCCGTTGAAATGAGTGATCTTCTGT
TGTGGGAATGAGTTATAATCAGTATTCATCTCTATTTTTGTCACTGTTCTAATTGTGTCA
TTTGTATCGTTTGAAAATATTTCTTCTTTAAAATTAAACTAACCTGCC

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               5-395, gnl|bosTau2|chrX (41295557-41295165)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-395, gnl|bosTau2|chrX (41295557-41295165)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               bla (0.248694)
               

               
               duo (0.172801)
               

               
               ova (0.129132)
               

               
               ese (0.126502)
               

               
               clu (0.119646)
               

               
               ebs (0.118301)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bla (0.248694)
               

               
               duo (0.172801)
               

               
               ova (0.129132)
               

               
               ese (0.126502)
               

               
               clu (0.119646)
               

               
               ebs (0.118301)

	bla (0.248694)
	duo (0.172801)
	ova (0.129132)
	ese (0.126502)
	clu (0.119646)
	ebs (0.118301)