Ss1.1-rebs15c_i8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCCTGTGGAAGAGGAGGAGGGGGGGGCGCCTTGGCCTGCCTCCCCGTTGATGCACATAG AGGGCTTCCTTGCCGCTCTCACCACTGCCAACCAGGACGGCAGGGTCATTCTGAGCCGCC AAGGGGGACTCAGTCAGAGCAGCCTCAAATTCTTGCTCCTGAATCCAGCCGTGCACTTTG CCCAGGTGGTGAAGGAATGCCGGGCAGTGGTCATCGCGGGGGGCACCATGCAGCCGGTGT CTGACTTCCGGGAGCAGCTGCTGGCGTGTGCCGGGGTGGAAGCTGAGCGCGTGGTGGAGT TCTCCTGTGGTCACGTGATCCCTCCAGACAACATCCTGCCCCTCGTCATCTGCAGCGGGC CTGCCAACCAGCAGCTGGAATTCACATACCAGAAGAGGGAGCTGCCACAGATGATGGATG AGACGGGACGCATCCTCTGTAACCTGTGCAACGTGGTCCCAGGCGGGGTGGTCTGTTTCT TCCCTTCCTACGAATACCAGCGCCAGGTCCATGCCCACTGGGACAGGAGCGGCCTGCTGG CCCGCCTGGCTGTCAGGAAGAAGATATTTCAGGAGCCCAAGAGAGCAAATCAGGTGGAGC AGGTGCTGAAGGAGTATTCCAGGTGCATCAAGCACTGTGGCCAGGCTGAGGGCATGGTGA CAGGGGCCCTGCTGCTCTCCGTAGTTGGAGGGAAGATGAGTGAAGGCATCAACTTCTCAG ACAGCCTTGGCCGGTGTGTGGTCATGGTGGGCATGCCCTACCCCAACATCAGGTCTGCGG AGCTGCAGGAGAAGATGGCTTACCTGGATCAGACCCTCCCCAGAGCCCCAGGCCAGGCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCCTGTGGAAGAGGAGGAGGGGGGGGCGCCTTGGCCTGCCTCCCCGTTGATGCACATAG AGGGCTTCCTTGCCGCTCTCACCACTGCCAACCAGGACGGCAGGGTCATTCTGAGCCGCC AAGGGGGACTCAGTCAGAGCAGCCTCAAATTCTTGCTCCTGAATCCAGCCGTGCACTTTG CCCAGGTGGTGAAGGAATGCCGGGCAGTGGTCATCGCGGGGGGCACCATGCAGCCGGTGT CTGACTTCCGGGAGCAGCTGCTGGCGTGTGCCGGGGTGGAAGCTGAGCGCGTGGTGGAGT TCTCCTGTGGTCACGTGATCCCTCCAGACAACATCCTGCCCCTCGTCATCTGCAGCGGGC CTGCCAACCAGCAGCTGGAATTCACATACCAGAAGAGGGAGCTGCCACAGATGATGGATG AGACGGGACGCATCCTCTGTAACCTGTGCAACGTGGTCCCAGGCGGGGTGGTCTGTTTCT TCCCTTCCTACGAATACCAGCGCCAGGTCCATGCCCACTGGGACAGGAGCGGCCTGCTGG CCCGCCTGGCTGTCAGGAAGAAGATATTTCAGGAGCCCAAGAGAGCAAATCAGGTGGAGC AGGTGCTGAAGGAGTATTCCAGGTGCATCAAGCACTGTGGCCAGGCTGAGGGCATGGTGA CAGGGGCCCTGCTGCTCTCCGTAGTTGGAGGGAAGATGAGTGAAGGCATCAACTTCTCAG ACAGCCTTGGCCGGTGTGTGGTCATGGTGGGCATGCCCTACCCCAACATCAGGTCTGCGG AGCTGCAGGAGAAGATGGCTTACCTGGATCAGACCCTCCCCAGAGCCCCAGGCCAGGCTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 122-238, gnl|bosTau2|chr5 (64969891-64970007) | |
| 122-238, gnl|Hg17|chr12 (9351063-9351179) | |
| 122-238, gnl|Mm7|chr17 (64361712-64361828) | |
| 413-563, gnl|bosTau2|chr5 (64973276-64973426) | |
| 413-563, gnl|Hg17|chr12 (9355003-9355153) | |
| 413-563, gnl|Mm7|chr17 (64366189-64366339) | |
| 631-735, gnl|bosTau2|chr5 (64973823-64973927) | |
| 631-735, gnl|canFam2|chr27 (45131297-45131431) | |
| 631-735, gnl|danRer3|chr18 (2361207-2361366) | |
| 631-735, gnl|dasNov1|scaffold_51511 (305-156) | |
| 631-735, gnl|echTel1|scaffold_212365 (6009-6135) | |
| 631-735, gnl|fr1|chrUn (21659214-21659336) | |
| 631-735, gnl|galGal2|chr1 (56599823-56599991) | |
| 631-735, gnl|hg17|chr12 (9355564-9355714) | |
| 631-735, gnl|loxAfr1|scaffold_5603 (60291-60439) | |
| 631-735, gnl|mm7|chr17 (64366719-64366870) | |
| 631-735, gnl|Mm7|chr17 (64366747-64366851) | |
| 631-735, gnl|monDom2|scaffold_31 (23641318-23641492) | |
| 631-735, gnl|oryCun1|scaffold_139397 (2932-2792) | |
| 631-735, gnl|panTro1|chr10 (9905712-9905862) | |
| 631-735, gnl|rheMac2|chr11 (9626856-9627006) | |
| 631-735, gnl|rn3|chr9 (105237299-105237446) | |
| 631-735, gnl|tetNig1|chr13 (3206269-3206157) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 122-238, gnl|bosTau2|chr5 (64969891-64970007) | |
| 122-238, gnl|Hg17|chr12 (9351063-9351179) | |
| 122-238, gnl|Mm7|chr17 (64361712-64361828) | |
| 413-563, gnl|bosTau2|chr5 (64973276-64973426) | |
| 413-563, gnl|Hg17|chr12 (9355003-9355153) | |
| 413-563, gnl|Mm7|chr17 (64366189-64366339) | |
| 631-735, gnl|bosTau2|chr5 (64973823-64973927) | |
| 631-735, gnl|canFam2|chr27 (45131297-45131431) | |
| 631-735, gnl|danRer3|chr18 (2361207-2361366) | |
| 631-735, gnl|dasNov1|scaffold_51511 (305-156) | |
| 631-735, gnl|echTel1|scaffold_212365 (6009-6135) | |
| 631-735, gnl|fr1|chrUn (21659214-21659336) | |
| 631-735, gnl|galGal2|chr1 (56599823-56599991) | |
| 631-735, gnl|hg17|chr12 (9355564-9355714) | |
| 631-735, gnl|loxAfr1|scaffold_5603 (60291-60439) | |
| 631-735, gnl|mm7|chr17 (64366719-64366870) | |
| 631-735, gnl|Mm7|chr17 (64366747-64366851) | |
| 631-735, gnl|monDom2|scaffold_31 (23641318-23641492) | |
| 631-735, gnl|oryCun1|scaffold_139397 (2932-2792) | |
| 631-735, gnl|panTro1|chr10 (9905712-9905862) | |
| 631-735, gnl|rheMac2|chr11 (9626856-9627006) | |
| 631-735, gnl|rn3|chr9 (105237299-105237446) | |
| 631-735, gnl|tetNig1|chr13 (3206269-3206157) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |