Non-Coding RNA Search

Ss1.1-rebs15c_k21.5

Sequence:


               
               GAGACACAGTGTCTGAAAGAACACTGAACACTTAAACTGTCTTTCTAGACCAACCCTGGA
ATGGTCCCCAGCCATGGATTCGGCCCCAGATCTTACTTCTTTGACAACCCTCGAAGATAC
GACAGTGATGATGACCTTGCCTGGAACATCGCTCCTCAGGGACTTCAGGGAAGTTTTGCT
CCAGACTACTATGATTGGGGACGACAGACTAACAGCTTCCTGGCACAAGTAGGAACTTTA
CAACCAGACTCAGCTTTGGATCCTGACAAACCAAGCCATGGGTAGCATCAGTTAAAAGTT
TAATGGAAGATTCCTCAGTTGAAAAGCTTCAGAGAGACTAACTTAATGACAGCTGAATTT
TTAGGGCACATCTCCTTAAGAAAAAGGACTTATTTTTTGTTACAGGTTTCTGATGGCTAC
ATTGAACTAAGCAATAATTTTAGATTGAGAAAACCTTATTTTAGTACTAAAAAGTGAGCC
TGGCTGCCTACTTCAGTGAGTGTAACTTAAAACTTTAAAAAAAAATTCTGTACTTTTATA
AAGATGTATTTTATATAACTTAATAATGCTAAAATATACTAGGTTTTTTTTTTGAGAATG
TCATTGCAATATATGTTGTAGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGACACAGTGTCTGAAAGAACACTGAACACTTAAACTGTCTTTCTAGACCAACCCTGGA
ATGGTCCCCAGCCATGGATTCGGCCCCAGATCTTACTTCTTTGACAACCCTCGAAGATAC
GACAGTGATGATGACCTTGCCTGGAACATCGCTCCTCAGGGACTTCAGGGAAGTTTTGCT
CCAGACTACTATGATTGGGGACGACAGACTAACAGCTTCCTGGCACAAGTAGGAACTTTA
CAACCAGACTCAGCTTTGGATCCTGACAAACCAAGCCATGGGTAGCATCAGTTAAAAGTT
TAATGGAAGATTCCTCAGTTGAAAAGCTTCAGAGAGACTAACTTAATGACAGCTGAATTT
TTAGGGCACATCTCCTTAAGAAAAAGGACTTATTTTTTGTTACAGGTTTCTGATGGCTAC
ATTGAACTAAGCAATAATTTTAGATTGAGAAAACCTTATTTTAGTACTAAAAAGTGAGCC
TGGCTGCCTACTTCAGTGAGTGTAACTTAAAACTTTAAAAAAAAATTCTGTACTTTTATA
AAGATGTATTTTATATAACTTAATAATGCTAAAATATACTAGGTTTTTTTTTTGAGAATG
TCATTGCAATATATGTTGTAGTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-173, gnl|bosTau2|chr28 (4387892-4388064)
               

               
               1-173, gnl|Hg17|chr1 (232694420-232694591)
               

               
               1-173, gnl|Mm7|chr13 (12704188-12704025)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-173, gnl|bosTau2|chr28 (4387892-4388064)
               

               
               1-173, gnl|Hg17|chr1 (232694420-232694591)
               

               
               1-173, gnl|Mm7|chr13 (12704188-12704025)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               hea (0.204499)
               

               
               ski (0.146735)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               ski (0.146735)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

	1-173, gnl\|bosTau2\|chr28 (4387892-4388064)
	1-173, gnl\|Hg17\|chr1 (232694420-232694591)
	1-173, gnl\|Mm7\|chr13 (12704188-12704025)