Non-Coding RNA Search

Ss1.1-rebs15c_n15.5

Sequence:


               
               ACTCGGCTCTCGCCCGTGAGGCCCGGTGGAGGCAGCGGCGGCGCGGGAGGAGCGGTGGAC
CGGCGTCTGGAACTCTATTTTGAGAACCTCTCAAAAAGGAAAACACAAATCATGGAAAAG
AAGGAGAATAACCGAAAGCTTCGGGTTTGTGTGGCTACTTGCAACCGTGCTGATTATTCT
AAACTTGCCCCAATCATGTTTGGCATTAAAATGGAACCTGAGTTCTTTGAACTTGACGTG
GTGGTACTCGGCTCTCACCTGATAGATGACTATGGGTAAGATGAAAGCTTTTTCTTATGA
TATTCTTCACTGCAACATAAGGTACTGGAGAGAACATGGATCTTGGAGCCACACGGACCA
GCTTCAAATCCCAGTTTTACCACTTAGTTTATGTATTGGCCTTGGTGAAGCTGCCCAGCC
TCTTTGAGCCTCAGGTTGCTCAGTTGGAGTGAAAACTTGTGTTGTAGGTTATGAAGAATA
GAGACAGTTTTATAATTATCTATGCAGTAATGCTGCCTAATAGATGCTTGGTAAATTACA
GCTACTATTACTATTATTTGCTATTCATTTCAGAAATGGCATTTATAAAGAGAAATTGTG
TAACTCTAATGTGAGTCTATGCAACCTGTTTTGTGAGTTCTAATGGTACTTCTGCATTAA
TGGTAATAAGAATTACTACTGCAAATAAAGCAGTAGATATGGAATAAGATTTTTAAAATC
TAATTGATCTACAAGTTAAGTAGAATTTTATATTACCATTACCATTGGTACTTACTTTGG
TGACATTAGATTTGTTATGGATCACAGTCTAAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTCGGCTCTCGCCCGTGAGGCCCGGTGGAGGCAGCGGCGGCGCGGGAGGAGCGGTGGAC
CGGCGTCTGGAACTCTATTTTGAGAACCTCTCAAAAAGGAAAACACAAATCATGGAAAAG
AAGGAGAATAACCGAAAGCTTCGGGTTTGTGTGGCTACTTGCAACCGTGCTGATTATTCT
AAACTTGCCCCAATCATGTTTGGCATTAAAATGGAACCTGAGTTCTTTGAACTTGACGTG
GTGGTACTCGGCTCTCACCTGATAGATGACTATGGGTAAGATGAAAGCTTTTTCTTATGA
TATTCTTCACTGCAACATAAGGTACTGGAGAGAACATGGATCTTGGAGCCACACGGACCA
GCTTCAAATCCCAGTTTTACCACTTAGTTTATGTATTGGCCTTGGTGAAGCTGCCCAGCC
TCTTTGAGCCTCAGGTTGCTCAGTTGGAGTGAAAACTTGTGTTGTAGGTTATGAAGAATA
GAGACAGTTTTATAATTATCTATGCAGTAATGCTGCCTAATAGATGCTTGGTAAATTACA
GCTACTATTACTATTATTTGCTATTCATTTCAGAAATGGCATTTATAAAGAGAAATTGTG
TAACTCTAATGTGAGTCTATGCAACCTGTTTTGTGAGTTCTAATGGTACTTCTGCATTAA
TGGTAATAAGAATTACTACTGCAAATAAAGCAGTAGATATGGAATAAGATTTTTAAAATC
TAATTGATCTACAAGTTAAGTAGAATTTTATATTACCATTACCATTGGTACTTACTTTGG
TGACATTAGATTTGTTATGGATCACAGTCTAAAATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               66-813, gnl|bosTau2|chr8 (31987481-31986752)
               

               
               66-813, gnl|Hg17|chr9 (36239398-36238639)
               

               
               66-813, gnl|Mm7|chr4 (44080778-44079799)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               66-813, gnl|bosTau2|chr8 (31987481-31986752)
               

               
               66-813, gnl|Hg17|chr9 (36239398-36238639)
               

               
               66-813, gnl|Mm7|chr4 (44080778-44079799)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	66-813, gnl\|bosTau2\|chr8 (31987481-31986752)
	66-813, gnl\|Hg17\|chr9 (36239398-36238639)
	66-813, gnl\|Mm7\|chr4 (44080778-44079799)