Non-Coding RNA Search

Ss1.1-rebs16c_i8.5

Sequence:


               
               GGTGGCTCCCCCACCTGCCGTGACAGCCTCCAGGCCAGGAACCGTCAGGGAGGCTGGCTG
ACATCAAATTCCTGTGGACGAGTGGCATTGGTAGAGAACAGGACGGGGACTTACGTACAG
GGTGGTCCAGAAAGACGATAAAAGCTGAGGCCAAGCTGCCACCTGTAGGCCATCCAAACA
CTTGGCGAAGAGGGTGCCTCGTGGAATAGTCGGTGCACAGCTGAAATACTTCCTGGGAGC
AGTGGCTGTTGGGGGAGGGAGGGGAGAAGGGGAAAAAAAAAAGAAGCTGAACACATCAAG
AGATGCATCAGAAGATCACAATCAGTTCTATGCTGCCAAAGATTTTAAAAAAATGAAAAA
ATACACAAAAAATTAAGAGGGGCCAAGAAGACATTCTTTCTGCAATGACGTCTCTTTTAA
ATCCTCAACTGCTACTGTATTCCCCCCGCCCCGTGAAAGTCAACCGTCTGTACTGTCCCC
CTCTTGTCCCCGCTCCCTTAACATTCCACCTCCCGCCTCCACCGAGAGCCCGAGACACTA
ACCCACTGTGAGGGTCCAGTCGGGGGAGGCGGCTTGGCTGGCGTTGCTGACTTGGAGCTC
CATGAGCCTGGACCTGAAGGAGAACAGACCGGGCAGAGGGCGGGGAGTAGCCGAGTTGGA
CGCCCAGCCCTGGCCTTTGGAGGGGTAGGGGTTCAGGCCTAGACACAGAGCTGCTTTCCT
CTGGGGCCTTGTAGGAAACATAAGATGATGATCGCTCAAAGTGATTCTCATTAAAACAAC
CAGTAAAAGTGAATCCTGTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGGCTCCCCCACCTGCCGTGACAGCCTCCAGGCCAGGAACCGTCAGGGAGGCTGGCTG
ACATCAAATTCCTGTGGACGAGTGGCATTGGTAGAGAACAGGACGGGGACTTACGTACAG
GGTGGTCCAGAAAGACGATAAAAGCTGAGGCCAAGCTGCCACCTGTAGGCCATCCAAACA
CTTGGCGAAGAGGGTGCCTCGTGGAATAGTCGGTGCACAGCTGAAATACTTCCTGGGAGC
AGTGGCTGTTGGGGGAGGGAGGGGAGAAGGGGAAAAAAAAAAGAAGCTGAACACATCAAG
AGATGCATCAGAAGATCACAATCAGTTCTATGCTGCCAAAGATTTTAAAAAAATGAAAAA
ATACACAAAAAATTAAGAGGGGCCAAGAAGACATTCTTTCTGCAATGACGTCTCTTTTAA
ATCCTCAACTGCTACTGTATTCCCCCCGCCCCGTGAAAGTCAACCGTCTGTACTGTCCCC
CTCTTGTCCCCGCTCCCTTAACATTCCACCTCCCGCCTCCACCGAGAGCCCGAGACACTA
ACCCACTGTGAGGGTCCAGTCGGGGGAGGCGGCTTGGCTGGCGTTGCTGACTTGGAGCTC
CATGAGCCTGGACCTGAAGGAGAACAGACCGGGCAGAGGGCGGGGAGTAGCCGAGTTGGA
CGCCCAGCCCTGGCCTTTGGAGGGGTAGGGGTTCAGGCCTAGACACAGAGCTGCTTTCCT
CTGGGGCCTTGTAGGAAACATAAGATGATGATCGCTCAAAGTGATTCTCATTAAAACAAC
CAGTAAAAGTGAATCCTGTTTTTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-804, gnl|bosTau2|chr13 (16301306-16302073)
               

               
               1-804, gnl|Hg17|chr10 (13728689-13727901)
               

               
               1-804, gnl|Mm7|chr2 (4528588-4529293)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-804, gnl|bosTau2|chr13 (16301306-16302073)
               

               
               1-804, gnl|Hg17|chr10 (13728689-13727901)
               

               
               1-804, gnl|Mm7|chr2 (4528588-4529293)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               nms (0.427716)
               

               
               mas (0.210305)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nms (0.427716)
               

               
               mas (0.210305)
               

               
               ebs (0.118301)

	1-804, gnl\|bosTau2\|chr13 (16301306-16302073)
	1-804, gnl\|Hg17\|chr10 (13728689-13727901)
	1-804, gnl\|Mm7\|chr2 (4528588-4529293)