Non-Coding RNA Search

Ss1.1-rebs17c_h19.5

Sequence:


               
               TTACAAAGAAGATTTGATATTTTTGATGCTCATAGTTTATAGGATAGGTGAAATGTTTCT
TCAAAGTAGCTGGTTTATTTGTATGTTTAGTTGGGAAAAAGTTTATTCTTTTTTTTTTAA
GAATTAGATACATTCAATATCTCTGTGACTCATCTTTTTTTTTTTCATTTATAAATGCTG
AGGAAGGTAGGAACCAAGTAATTATTAAAGTTAGTTTGGGATTAGGTACTTCAAAAATAA
GACTTGCTATTATGTGTACCTTTCTGTCTGCAGGTCATTATTGCTGTGGTTTGAGCTCAG
CATGGCTGTAGTCATCCGTTTACTGGGGCTTCCTTTTATTGCGGGGCCTGTGGATATTCG
TCACTTCTTCACGGGATTGACTATTCCTGATGGAGGAGTGCATATAATTGGAGGGGAAGT
TGGGGAGGCTTTTATTATTTTTGCAACAGATGAAGATGCAAGACGTGCCATAAGTCGTTC
AGGAGGGTTTATCAAGGATTCATCTGTAGAGCTCTTTCTTAGTAGTAAGGCAGAAATGCA
GAAGACTATAGAAATGAAAAGAACTGATCGCATGGGAAGAGATCGACCAGGATCTGGGGC
ACCAGGGGTTGGCAGCTTATCTAATTTTGTTGAGGCGCTTAAAGAAGAAGCAAGTAATTC
TGGATATGGCTCTCCAATTAATCAAGATGCTGGGTTTCATACTAATGGTACAGGACATGG
TGATTTAAGGCCAAGAAAGACACGGCCATTGAAAGCTGAAAATCCTTACTTGTTTCTGCG
AGGTTTGCCTTACTTAGTAAATGAAGATGATGTACGTGTCTTTTTCTCTGGTTTGTGTGT
GGATGGAGTAATTTTCTTAAAGCATCATGATGGCCGAAATAATGGTGATGCCATAGTAAA
ATTTGCTTCATGTATTGATGCTTCAGGAGGTCTTAAATGTCATAGAAGTTTTATGGGTTC
AAGATTTATAGAAGTAATGCAAGGCTCAGAACAACAGTGGATTGAGTTTGGTGGTAATGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTACAAAGAAGATTTGATATTTTTGATGCTCATAGTTTATAGGATAGGTGAAATGTTTCT
TCAAAGTAGCTGGTTTATTTGTATGTTTAGTTGGGAAAAAGTTTATTCTTTTTTTTTTAA
GAATTAGATACATTCAATATCTCTGTGACTCATCTTTTTTTTTTTCATTTATAAATGCTG
AGGAAGGTAGGAACCAAGTAATTATTAAAGTTAGTTTGGGATTAGGTACTTCAAAAATAA
GACTTGCTATTATGTGTACCTTTCTGTCTGCAGGTCATTATTGCTGTGGTTTGAGCTCAG
CATGGCTGTAGTCATCCGTTTACTGGGGCTTCCTTTTATTGCGGGGCCTGTGGATATTCG
TCACTTCTTCACGGGATTGACTATTCCTGATGGAGGAGTGCATATAATTGGAGGGGAAGT
TGGGGAGGCTTTTATTATTTTTGCAACAGATGAAGATGCAAGACGTGCCATAAGTCGTTC
AGGAGGGTTTATCAAGGATTCATCTGTAGAGCTCTTTCTTAGTAGTAAGGCAGAAATGCA
GAAGACTATAGAAATGAAAAGAACTGATCGCATGGGAAGAGATCGACCAGGATCTGGGGC
ACCAGGGGTTGGCAGCTTATCTAATTTTGTTGAGGCGCTTAAAGAAGAAGCAAGTAATTC
TGGATATGGCTCTCCAATTAATCAAGATGCTGGGTTTCATACTAATGGTACAGGACATGG
TGATTTAAGGCCAAGAAAGACACGGCCATTGAAAGCTGAAAATCCTTACTTGTTTCTGCG
AGGTTTGCCTTACTTAGTAAATGAAGATGATGTACGTGTCTTTTTCTCTGGTTTGTGTGT
GGATGGAGTAATTTTCTTAAAGCATCATGATGGCCGAAATAATGGTGATGCCATAGTAAA
ATTTGCTTCATGTATTGATGCTTCAGGAGGTCTTAAATGTCATAGAAGTTTTATGGGTTC
AAGATTTATAGAAGTAATGCAAGGCTCAGAACAACAGTGGATTGAGTTTGGTGGTAATGC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               Q8CD70_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q8CD70_MOUSE

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               10-1018, gnl|bosTau2|chr14 (43817346-43818359)
               

               
               10-1018, gnl|Hg17|chr8 (94818116-94817098)
               

               
               10-1018, gnl|Mm7|chr4 (12070888-12071890)
               


               
               285-557, gnl|bosTau2|chr13 (45098510-45098238)
               

               
               285-557, gnl|Hg17|chr20 (33706675-33706403)
               

               
               285-557, gnl|Mm7|chr2 (155839225-155838953)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-1018, gnl|bosTau2|chr14 (43817346-43818359)
               

               
               10-1018, gnl|Hg17|chr8 (94818116-94817098)
               

               
               10-1018, gnl|Mm7|chr4 (12070888-12071890)
               


               
               285-557, gnl|bosTau2|chr13 (45098510-45098238)
               

               
               285-557, gnl|Hg17|chr20 (33706675-33706403)
               

               
               285-557, gnl|Mm7|chr2 (155839225-155838953)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	10-1018, gnl\|bosTau2\|chr14 (43817346-43818359)
	10-1018, gnl\|Hg17\|chr8 (94818116-94817098)
	10-1018, gnl\|Mm7\|chr4 (12070888-12071890)

	285-557, gnl\|bosTau2\|chr13 (45098510-45098238)
	285-557, gnl\|Hg17\|chr20 (33706675-33706403)
	285-557, gnl\|Mm7\|chr2 (155839225-155838953)