Ss1.1-rebs17c_l16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAACAGCGGCAGCGCGGCCGGGGGCGGGTTCCGCGCGGGGCGGGGGATGTGAATCCCAT GGAGCGGCCCGGGGAAGGAGAGCAGCTGCCGCACCATCAGCCGTGGGGGAGGCTCCTCCG CCTGGGCGCCGAGGAGGGCGAGCCGCACGTCCTCCTGAGAAAGCGGGAGTGGACCATCGG GCGGAAAAAAGGTTGTGACCTTTCATTCCCTGGCAATAAACTGGTCTCTGGAGATCACTG TAAAATTGTAGTGGATGAAAAATCTGGTCAGGTGTCGCTGGAAGATACCAGCACTAATGG AACAGTAATTAACAAGCTGAAGGTTGTTAAGAAGCAGACCTGCCCCTTACAGACTGGAGA TGTCATCTACTTGGTGTATAGGAAGAATGAGCCAGAACACAATGTGGCATACCTCTACGA ATCCCTAAGTGAGAAGCAAGGCTTGACAAGGGACTCCTCTGAAGCGAATAAAGAAAATGT GTTCCATGTGACCAAAGATACCTCAGGTGCAGGGCAAGGCGATGGTCCCCAGGTCCTACC GTCATCGCCCGCCACTCAGGGGTGCTTTGAGGAACCACAGCCATCAACGTCGACGTCAGA CCTCTTCCCCACGGCCTCTACCTCTTCCGTGGAGCCCACTTCTGCAGGGCGAGGACCGCC CTCTAGCTCCGGCTCCAGAGGTGCAGGTGCCTCCCCAAAAGGGTGTGGTCTATCTGTGAC CAGTGGTGACATTGCCAGCTTCCCCTCGGCCCTCCCAGATAGGGAGGGAGCCCCCTTTCC TCTGTCAGAATCCCAGGATCAGGAAGATCTGGAGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAACAGCGGCAGCGCGGCCGGGGGCGGGTTCCGCGCGGGGCGGGGGATGTGAATCCCAT GGAGCGGCCCGGGGAAGGAGAGCAGCTGCCGCACCATCAGCCGTGGGGGAGGCTCCTCCG CCTGGGCGCCGAGGAGGGCGAGCCGCACGTCCTCCTGAGAAAGCGGGAGTGGACCATCGG GCGGAAAAAAGGTTGTGACCTTTCATTCCCTGGCAATAAACTGGTCTCTGGAGATCACTG TAAAATTGTAGTGGATGAAAAATCTGGTCAGGTGTCGCTGGAAGATACCAGCACTAATGG AACAGTAATTAACAAGCTGAAGGTTGTTAAGAAGCAGACCTGCCCCTTACAGACTGGAGA TGTCATCTACTTGGTGTATAGGAAGAATGAGCCAGAACACAATGTGGCATACCTCTACGA ATCCCTAAGTGAGAAGCAAGGCTTGACAAGGGACTCCTCTGAAGCGAATAAAGAAAATGT GTTCCATGTGACCAAAGATACCTCAGGTGCAGGGCAAGGCGATGGTCCCCAGGTCCTACC GTCATCGCCCGCCACTCAGGGGTGCTTTGAGGAACCACAGCCATCAACGTCGACGTCAGA CCTCTTCCCCACGGCCTCTACCTCTTCCGTGGAGCCCACTTCTGCAGGGCGAGGACCGCC CTCTAGCTCCGGCTCCAGAGGTGCAGGTGCCTCCCCAAAAGGGTGTGGTCTATCTGTGAC CAGTGGTGACATTGCCAGCTTCCCCTCGGCCCTCCCAGATAGGGAGGGAGCCCCCTTTCC TCTGTCAGAATCCCAGGATCAGGAAGATCTGGAGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 47-193, gnl|bosTau2|chr2 (78700101-78699955) | |
| 47-193, gnl|Hg17|chr12 (132074277-132074130) | |
| 47-193, gnl|Mm7|chr5 (109302573-109302719) | |
| 289-401, gnl|bosTau2|chr2 (78692635-78692523) | |
| 289-401, gnl|canFam2|chr26 (3308097-3307946) | |
| 289-401, gnl|danRer3|chr15 (15249144-15249272) | |
| 289-401, gnl|dasNov1|scaffold_83343 (6747-6901) | |
| 289-401, gnl|echTel1|scaffold_93774 (3940-4074) | |
| 289-401, gnl|fr1|chrUn (71814322-71814187) | |
| 289-401, gnl|galGal2|chr15 (1496071-1496208) | |
| 289-401, gnl|hg17|chr12 (132059195-132059348) | |
| 289-401, gnl|Hg17|chr12 (132059333-132059221) | |
| 289-401, gnl|mm7|chr5 (109310208-109310038) | |
| 289-401, gnl|Mm7|chr5 (109310071-109310183) | |
| 289-401, gnl|monDom2|scaffold_54 (2008605-2008739) | |
| 289-401, gnl|oryCun1|scaffold_180903 (6507-6661) | |
| 289-401, gnl|panTro1|chr10_random (11520185-11520032) | |
| 289-401, gnl|rheMac2|chr11 (134164044-134164197) | |
| 289-401, gnl|rn3|chr12 (46542998-46543147) | |
| 289-401, gnl|tetNig1|chr12 (10799760-10799624) | |
| 461-670, gnl|bosTau2|chr2 (78691444-78691226) | |
| 461-670, gnl|Hg17|chr12 (132056771-132056556) | |
| 461-670, gnl|Mm7|chr5 (109311294-109311509) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 47-193, gnl|bosTau2|chr2 (78700101-78699955) | |
| 47-193, gnl|Hg17|chr12 (132074277-132074130) | |
| 47-193, gnl|Mm7|chr5 (109302573-109302719) | |
| 289-401, gnl|bosTau2|chr2 (78692635-78692523) | |
| 289-401, gnl|canFam2|chr26 (3308097-3307946) | |
| 289-401, gnl|danRer3|chr15 (15249144-15249272) | |
| 289-401, gnl|dasNov1|scaffold_83343 (6747-6901) | |
| 289-401, gnl|echTel1|scaffold_93774 (3940-4074) | |
| 289-401, gnl|fr1|chrUn (71814322-71814187) | |
| 289-401, gnl|galGal2|chr15 (1496071-1496208) | |
| 289-401, gnl|hg17|chr12 (132059195-132059348) | |
| 289-401, gnl|Hg17|chr12 (132059333-132059221) | |
| 289-401, gnl|mm7|chr5 (109310208-109310038) | |
| 289-401, gnl|Mm7|chr5 (109310071-109310183) | |
| 289-401, gnl|monDom2|scaffold_54 (2008605-2008739) | |
| 289-401, gnl|oryCun1|scaffold_180903 (6507-6661) | |
| 289-401, gnl|panTro1|chr10_random (11520185-11520032) | |
| 289-401, gnl|rheMac2|chr11 (134164044-134164197) | |
| 289-401, gnl|rn3|chr12 (46542998-46543147) | |
| 289-401, gnl|tetNig1|chr12 (10799760-10799624) | |
| 461-670, gnl|bosTau2|chr2 (78691444-78691226) | |
| 461-670, gnl|Hg17|chr12 (132056771-132056556) | |
| 461-670, gnl|Mm7|chr5 (109311294-109311509) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) |