Non-Coding RNA Search

Ss1.1-rebs19c_d16.5

Sequence:


               
               GCAGCAAGTTCAGCTGGGCTTCTTGAGGCGAGGAAGATGGATGGAGAGAAAGAGGGCCCG
CTTCCTCTCAGGATGGAGCAAATGAGACCAGGAAGTCATTGATGGTGGCTAGTGTGACCA
GTTGCATGTTAACAGATTCACTTGTTCATGGGAAGCAGACTAAGTAGCAGAAAGTCCAGG
AAAGAGAAAGACTGAAAGGAGGAAAGAGAGAAGTGTTGATGGGGGAGCTGAACGTTGCAG
GAGTGGAAGAGGAGATAAGCAGTGTTAGTAAATACCGTGTGTTCAGTAGAAATTGAATAA
TCATTTTTAAGACTTAAAATCAGAAGCATTTCCAAACTAAAAACTAAGCAAAATGGGAAT
GGGACTTGCTGTAAATGCATTTTTAACTTATGAAAGAAAGTTTGGGGGGCGTCCCTGAGT
CAGGTGGAGCTGATGTTGGGGGTGGGAAGGATGACAGCAGCCCAGGACTCATGTGCTTGG
CCCAGGCCATGTCCTCAGTGAGAGGTGTTGGGCTCCACGCATGTGCATCGTGGGGTAGTC
AGTCAACATGGGGTGTGTTTAAAGTCAGCAGTTACAAAATTAGTTTACTTCGAATTGTGT
TTTCTAAATAGCTTCTGCTTTTTTTTTTTTTTTTAAATTTAATTTTTTTTTAAACTACCA
CAGGCTGGCCTACTAGTAGAGAATGGGTGACCAACCTCTCATTTTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCAAGTTCAGCTGGGCTTCTTGAGGCGAGGAAGATGGATGGAGAGAAAGAGGGCCCG
CTTCCTCTCAGGATGGAGCAAATGAGACCAGGAAGTCATTGATGGTGGCTAGTGTGACCA
GTTGCATGTTAACAGATTCACTTGTTCATGGGAAGCAGACTAAGTAGCAGAAAGTCCAGG
AAAGAGAAAGACTGAAAGGAGGAAAGAGAGAAGTGTTGATGGGGGAGCTGAACGTTGCAG
GAGTGGAAGAGGAGATAAGCAGTGTTAGTAAATACCGTGTGTTCAGTAGAAATTGAATAA
TCATTTTTAAGACTTAAAATCAGAAGCATTTCCAAACTAAAAACTAAGCAAAATGGGAAT
GGGACTTGCTGTAAATGCATTTTTAACTTATGAAAGAAAGTTTGGGGGGCGTCCCTGAGT
CAGGTGGAGCTGATGTTGGGGGTGGGAAGGATGACAGCAGCCCAGGACTCATGTGCTTGG
CCCAGGCCATGTCCTCAGTGAGAGGTGTTGGGCTCCACGCATGTGCATCGTGGGGTAGTC
AGTCAACATGGGGTGTGTTTAAAGTCAGCAGTTACAAAATTAGTTTACTTCGAATTGTGT
TTTCTAAATAGCTTCTGCTTTTTTTTTTTTTTTTAAATTTAATTTTTTTTTAAACTACCA
CAGGCTGGCCTACTAGTAGAGAATGGGTGACCAACCTCTCATTTTACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-708, gnl|bosTau2|chr18 (26696638-26695929)
               

               
               1-708, gnl|Hg17|chr16 (65314883-65314184)
               

               
               1-708, gnl|Mm7|chr8 (103019645-103018956)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-708, gnl|bosTau2|chr18 (26696638-26695929)
               

               
               1-708, gnl|Hg17|chr16 (65314883-65314184)
               

               
               1-708, gnl|Mm7|chr8 (103019645-103018956)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fty (0.17584)
               

               
               ebs (0.118301)
               

               
               ecc (0.115035)
               

               
               jca (0.11396)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fty (0.17584)
               

               
               ebs (0.118301)
               

               
               ecc (0.115035)
               

               
               jca (0.11396)

	1-708, gnl\|bosTau2\|chr18 (26696638-26695929)
	1-708, gnl\|Hg17\|chr16 (65314883-65314184)
	1-708, gnl\|Mm7\|chr8 (103019645-103018956)