Ss1.1-rebs19c_d20.5
|
ATCTACCTCCCTCTCAGTCGATGTGCCCGGCATGGGGCCTGTCGGAGGAGCTGTCTGGCT
TCTCAGGACCCATACTGTGGATGGGATAGCTCCAGAGGCTGTGTGGATATCAGGGGACCT
GGTGGGACTGATGTGGATCCAGCTGGGAAACAGGAATCCATGGAAGTTGATGACTGCCAA
GATGGAGCTACTGGAAGTCAGTCTGGCACAGGGGATTCTACTTACGGCGTGCGCCGAGAC
CTCCCCCCAGCCTCAGCCTCCCGCTCGGTCCCCATCCCACTCCTTCTGGCCTGTGTGGCT
GCAGCCTTCGCCATGGGCGCCTCGGTCTCTGGCCTCTTGGTCTCCTGCGCTTGTCGCCGC
GCCCACCGACATCGAAGCAAGGACATCGAGAGTCCAGGGCTCCCGCGCCCTCTTTCCCTT
CGTAGCTTGGCCCGGCTGCACGGGGCGGGCCCAGAGCCGCCGCCGCCGCCCAAGGACGGA
GAGGGGGCGCTGACGCCCCAGCTCTACACCACCTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCTACCTCCCTCTCAGTCGATGTGCCCGGCATGGGGCCTGTCGGAGGAGCTGTCTGGCT
TCTCAGGACCCATACTGTGGATGGGATAGCTCCAGAGGCTGTGTGGATATCAGGGGACCT
GGTGGGACTGATGTGGATCCAGCTGGGAAACAGGAATCCATGGAAGTTGATGACTGCCAA
GATGGAGCTACTGGAAGTCAGTCTGGCACAGGGGATTCTACTTACGGCGTGCGCCGAGAC
CTCCCCCCAGCCTCAGCCTCCCGCTCGGTCCCCATCCCACTCCTTCTGGCCTGTGTGGCT
GCAGCCTTCGCCATGGGCGCCTCGGTCTCTGGCCTCTTGGTCTCCTGCGCTTGTCGCCGC
GCCCACCGACATCGAAGCAAGGACATCGAGAGTCCAGGGCTCCCGCGCCCTCTTTCCCTT
CGTAGCTTGGCCCGGCTGCACGGGGCGGGCCCAGAGCCGCCGCCGCCGCCCAAGGACGGA
GAGGGGGCGCTGACGCCCCAGCTCTACACCACCTTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
226-516, gnl|bosTau2|chr3 (16471339-16471629) |
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226-516, gnl|canFam2|chr17 (63276141-63276454) |
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226-516, gnl|dasNov1|scaffold_81156 (1458-1135) |
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226-516, gnl|fr1|chrUn (230678964-230679288) |
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226-516, gnl|galGal2|chr10 (10475709-10475409) |
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226-516, gnl|hg17|chr1 (147918771-147919087) |
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226-516, gnl|Hg17|chr1 (147919067-147918777) |
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226-516, gnl|loxAfr1|scaffold_57374 (5404-5088) |
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226-516, gnl|mm7|chr3 (95046501-95046185) |
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226-516, gnl|Mm7|chr3 (95046203-95046493) |
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226-516, gnl|monDom2|scaffold_44 (4314143-4314461) |
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226-516, gnl|panTro1|chr1 (129653557-129653873) |
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226-516, gnl|rheMac2|chr1 (129558063-129558379) |
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226-516, gnl|rn3|chr2 (190040511-190040195) |
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226-516, gnl|tetNig1|chrUn_random (40969480-40969817) |
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226-516, gnl|xenTro1|scaffold_96 (1891689-1891375) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
226-516, gnl|bosTau2|chr3 (16471339-16471629) |
|
226-516, gnl|canFam2|chr17 (63276141-63276454) |
|
226-516, gnl|dasNov1|scaffold_81156 (1458-1135) |
|
226-516, gnl|fr1|chrUn (230678964-230679288) |
|
226-516, gnl|galGal2|chr10 (10475709-10475409) |
|
226-516, gnl|hg17|chr1 (147918771-147919087) |
|
226-516, gnl|Hg17|chr1 (147919067-147918777) |
|
226-516, gnl|loxAfr1|scaffold_57374 (5404-5088) |
|
226-516, gnl|mm7|chr3 (95046501-95046185) |
|
226-516, gnl|Mm7|chr3 (95046203-95046493) |
|
226-516, gnl|monDom2|scaffold_44 (4314143-4314461) |
|
226-516, gnl|panTro1|chr1 (129653557-129653873) |
|
226-516, gnl|rheMac2|chr1 (129558063-129558379) |
|
226-516, gnl|rn3|chr2 (190040511-190040195) |
|
226-516, gnl|tetNig1|chrUn_random (40969480-40969817) |
|
226-516, gnl|xenTro1|scaffold_96 (1891689-1891375) |
