Non-Coding RNA Search

Ss1.1-rebs19c_f10.5

Sequence:


               
               TATATATATGTAAATTCTTCATATCTTTTTAGATCTAATTCAATATTTTCTGACTGCTTC
CTCCATGTATAATACCATTTTTGTGCATGCTTGATGTGACATTCATAAATTGTACCACTA
TGACTTTATTCATGTAAAATAGCTATTTATTGAATTTCCTTTTAAATCTGGATTTACTGG
GGTTTTTTTTCTCCGTTTAAGCATCTTAACAGAGAATTTGTTACTGTTTATTAGAAGAAT
TGCGTTTGAAAGCATGAAAATAACTGATTTGCAATCATATGAAGAAACAATAATGCCTTT
ACTATCAAGTGTTAAGCACAATTCTTATAACAAACTGTGATAAATTCTTTGGTTTTTTTT
TTTGGTTGGTTTGTTTTTCCTTTGCCACATTATTTTTGTATGAACAAACCAAAAATCCAT
GGTGAGCAATTGCAGTGTTGGCTGGATGTGTCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATATATATGTAAATTCTTCATATCTTTTTAGATCTAATTCAATATTTTCTGACTGCTTC
CTCCATGTATAATACCATTTTTGTGCATGCTTGATGTGACATTCATAAATTGTACCACTA
TGACTTTATTCATGTAAAATAGCTATTTATTGAATTTCCTTTTAAATCTGGATTTACTGG
GGTTTTTTTTCTCCGTTTAAGCATCTTAACAGAGAATTTGTTACTGTTTATTAGAAGAAT
TGCGTTTGAAAGCATGAAAATAACTGATTTGCAATCATATGAAGAAACAATAATGCCTTT
ACTATCAAGTGTTAAGCACAATTCTTATAACAAACTGTGATAAATTCTTTGGTTTTTTTT
TTTGGTTGGTTTGTTTTTCCTTTGCCACATTATTTTTGTATGAACAAACCAAAAATCCAT
GGTGAGCAATTGCAGTGTTGGCTGGATGTGTCTTTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-359, gnl|bosTau2|chr20 (12667658-12668018)
               

               
               1-359, gnl|Hg17|chr5 (56252400-56252029)
               

               
               1-359, gnl|Mm7|chr13 (108873909-108874271)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-359, gnl|bosTau2|chr20 (12667658-12668018)
               

               
               1-359, gnl|Hg17|chr5 (56252400-56252029)
               

               
               1-359, gnl|Mm7|chr13 (108873909-108874271)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               sin (0.174948)
               

               
               kid (0.129735)
               

               
               ebs (0.118301)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               sin (0.174948)
               

               
               kid (0.129735)
               

               
               ebs (0.118301)

	1-359, gnl\|bosTau2\|chr20 (12667658-12668018)
	1-359, gnl\|Hg17\|chr5 (56252400-56252029)
	1-359, gnl\|Mm7\|chr13 (108873909-108874271)