Ss1.1-rebs19c_l19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTAGTAAAGCCGCCGATATCGCCGCCGCTGTCGGGGCTTGTTATTTCTAAAATGGCGCC CCTGGACTTGGACAAGTATGTGGAGATAGCGCGTCTATGCAAGTACCTGCCCGAGAACGA CCTGAAGCGGTTGTGTGACTATGTTTGTGACCTCCTCTTGGAAGAGTCAAATGTCCAGCC AGTGTCGACACCTGTAACAGTGTGTGGAGACATACACGGACAGTTTTATGATCTTTGTGA ACTATTCAGAACTGGAGGTCAGGTTCCTGACACAAACTACATATTTATGGGTGATTTTGT AGACAGAGGTTATTATAGTTTGGAGACCTTCACTTACCTTCTTGCACTAAAGGCTAAATG GCCTGATCGTATTACACTTTTGCGAGGAAATCATGAGAGTAGACAGATAACACAGGTGTA TGGATTTTATGATGAGTGCCAAACCAAATATGGAAATGCTAATGCCTGGAGATACTGTAC CAAAGTTTTTGACATGCTCACAGTAGCAGCTTTAATAGATGAGCAGATTTTGTGTGTTCA TGGTGGTTTATCTCCCGATATCAAAACACTGGATCAGATCCGTACTAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTAGTAAAGCCGCCGATATCGCCGCCGCTGTCGGGGCTTGTTATTTCTAAAATGGCGCC CCTGGACTTGGACAAGTATGTGGAGATAGCGCGTCTATGCAAGTACCTGCCCGAGAACGA CCTGAAGCGGTTGTGTGACTATGTTTGTGACCTCCTCTTGGAAGAGTCAAATGTCCAGCC AGTGTCGACACCTGTAACAGTGTGTGGAGACATACACGGACAGTTTTATGATCTTTGTGA ACTATTCAGAACTGGAGGTCAGGTTCCTGACACAAACTACATATTTATGGGTGATTTTGT AGACAGAGGTTATTATAGTTTGGAGACCTTCACTTACCTTCTTGCACTAAAGGCTAAATG GCCTGATCGTATTACACTTTTGCGAGGAAATCATGAGAGTAGACAGATAACACAGGTGTA TGGATTTTATGATGAGTGCCAAACCAAATATGGAAATGCTAATGCCTGGAGATACTGTAC CAAAGTTTTTGACATGCTCACAGTAGCAGCTTTAATAGATGAGCAGATTTTGTGTGTTCA TGGTGGTTTATCTCCCGATATCAAAACACTGGATCAGATCCGTACTAT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | More info |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
| 2-166, gnl|bosTau2|chr11 (74760876-74760712) | |
| 289-436, gnl|bosTau2|chr11 (77008545-77008398) | |
| 289-436, gnl|canFam2|chr9 (61255441-61255273) | |
| 289-436, gnl|danRer3|chr5 (28253232-28253417) | |
| 289-436, gnl|dasNov1|scaffold_77402 (3101-3269) | |
| 289-436, gnl|echTel1|scaffold_314661 (45517-45685) | |
| 289-436, gnl|fr1|chrUn (200459364-200459200) | |
| 289-436, gnl|galGal2|chr17 (862775-862600) | |
| 289-436, gnl|hg17|chr9 (125000061-125000229) | |
| 289-436, gnl|Hg17|chr9 (125000216-125000069) | |
| 289-436, gnl|loxAfr1|scaffold_14019 (50727-50560) | |
| 289-436, gnl|mm7|chr2 (39212132-39212299) | |
| 289-436, gnl|Mm7|chr2 (39212286-39212139) | |
| 289-436, gnl|monDom2|scaffold_38 (19340881-19341044) | |
| 289-436, gnl|oryCun1|scaffold_130988 (10569-10737) | |
| 289-436, gnl|panTro1|chr11 (109793977-109794145) | |
| 289-436, gnl|rheMac2|chr15 (101479352-101479184) | |
| 289-436, gnl|rn3|chr3 (18871263-18871430) | |
| 289-436, gnl|tetNig1|chrUn_random (87467218-87467062) | |
| 289-436, gnl|xenTro1|scaffold_974 (118174-118342) |
| Aligned organism(s): 20 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-166, gnl|bosTau2|chr11 (74760876-74760712) | |
| 289-436, gnl|bosTau2|chr11 (77008545-77008398) | |
| 289-436, gnl|canFam2|chr9 (61255441-61255273) | |
| 289-436, gnl|danRer3|chr5 (28253232-28253417) | |
| 289-436, gnl|dasNov1|scaffold_77402 (3101-3269) | |
| 289-436, gnl|echTel1|scaffold_314661 (45517-45685) | |
| 289-436, gnl|fr1|chrUn (200459364-200459200) | |
| 289-436, gnl|galGal2|chr17 (862775-862600) | |
| 289-436, gnl|hg17|chr9 (125000061-125000229) | |
| 289-436, gnl|Hg17|chr9 (125000216-125000069) | |
| 289-436, gnl|loxAfr1|scaffold_14019 (50727-50560) | |
| 289-436, gnl|mm7|chr2 (39212132-39212299) | |
| 289-436, gnl|Mm7|chr2 (39212286-39212139) | |
| 289-436, gnl|monDom2|scaffold_38 (19340881-19341044) | |
| 289-436, gnl|oryCun1|scaffold_130988 (10569-10737) | |
| 289-436, gnl|panTro1|chr11 (109793977-109794145) | |
| 289-436, gnl|rheMac2|chr15 (101479352-101479184) | |
| 289-436, gnl|rn3|chr3 (18871263-18871430) | |
| 289-436, gnl|tetNig1|chrUn_random (87467218-87467062) | |
| 289-436, gnl|xenTro1|scaffold_974 (118174-118342) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| pgl (0.236967) | |
| cbl (0.229595) | |
| nco (0.161734) | |
| lun (0.150489) | |
| cly (0.120642) | |
| ebs (0.118301) | |
| ldo (0.0970026) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.236967) | |
| cbl (0.229595) | |
| nco (0.161734) | |
| lun (0.150489) | |
| cly (0.120642) | |
| ebs (0.118301) | |
| ldo (0.0970026) |