Ss1.1-rebs21c_b15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGCGGGAAAGCGGCGGCCGCAGCGTTTCTGCAGGACGCCGGGGAGCCTCAGGCGCCGG AGAGGCTGGGGCTGACTGTTGGCTCCACCATGGACGCGGCCGAGGTGGAGTTTCTGGCTG AAAAGGAGCTGGTCACCATTATCCCGAACTTCAGTCTGGACAAGATCTACCTCATCGGGG GCGACCTGGGGCCTTTCAACCCTGGCTTACCAGTGCAGGTGCCTCTGTGGCTGGCCATCA ACCTGAAACAAAGACAGAAGTGCCGGCTGCTCGCTCCCGAGTGGATGGACGTAGAGAAGT TGGAGAAGATGAGGGACCATGAGCGGAAGGAAGACACTTTTACGCCTGCGCCCAACCCTC ACTACACGGAACTCACGAAGCTCCTGCTGAACCACGCCTCGGACAACATCCCGAAAGCCG ATGAGATCCGGACCCTCATCAAGGACGTGTGGGACACTCGCGTAGCCAAGCTGCGCGTGT CTGCGGACAGCTTCGTGAGGCAGCAGGAGGCACACGCCAAGCTGGACAACCTGACGCTGA TGGAGGTCAACGCCGGCGGCGCCTTCCTCACGCGGGCGCTCAGCCACACATGTTCAAGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGCGGGAAAGCGGCGGCCGCAGCGTTTCTGCAGGACGCCGGGGAGCCTCAGGCGCCGG AGAGGCTGGGGCTGACTGTTGGCTCCACCATGGACGCGGCCGAGGTGGAGTTTCTGGCTG AAAAGGAGCTGGTCACCATTATCCCGAACTTCAGTCTGGACAAGATCTACCTCATCGGGG GCGACCTGGGGCCTTTCAACCCTGGCTTACCAGTGCAGGTGCCTCTGTGGCTGGCCATCA ACCTGAAACAAAGACAGAAGTGCCGGCTGCTCGCTCCCGAGTGGATGGACGTAGAGAAGT TGGAGAAGATGAGGGACCATGAGCGGAAGGAAGACACTTTTACGCCTGCGCCCAACCCTC ACTACACGGAACTCACGAAGCTCCTGCTGAACCACGCCTCGGACAACATCCCGAAAGCCG ATGAGATCCGGACCCTCATCAAGGACGTGTGGGACACTCGCGTAGCCAAGCTGCGCGTGT CTGCGGACAGCTTCGTGAGGCAGCAGGAGGCACACGCCAAGCTGGACAACCTGACGCTGA TGGAGGTCAACGCCGGCGGCGCCTTCCTCACGCGGGCGCTCAGCCACACATGTTCAAGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 1-180, gnl|bosTau2|chr18 (12163878-12163694) | |
| 1-180, gnl|Hg17|chr16 (84280095-84279915) | |
| 1-180, gnl|Mm7|chr8 (119224069-119223899) | |
| 396-524, gnl|bosTau2|chr18 (7937965-7937837) | |
| 396-524, gnl|canFam2|chr5 (69996140-69995995) | |
| 396-524, gnl|canFam2|chr5 (69996128-69996004) | |
| 396-524, gnl|danRer3|chr18 (30400569-30400427) | |
| 396-524, gnl|danRer3|chr18 (30400564-30400440) | |
| 396-524, gnl|dasNov1|scaffold_16016 (11705-11559) | |
| 396-524, gnl|dasNov1|scaffold_72000 (4677-4802) | |
| 396-524, gnl|echTel1|scaffold_78134 (985-861) | |
| 396-524, gnl|echTel1|scaffold_78134 (985-861) | |
| 396-524, gnl|fr1|chrUn (122971057-122971213) | |
| 396-524, gnl|fr1|chrUn (122971080-122971204) | |
| 396-524, gnl|galGal2|chr11 (17916774-17916634) | |
| 396-524, gnl|galGal2|chrUn (158176903-158176779) | |
| 396-524, gnl|hg17|chr16 (84269634-84269783) | |
| 396-524, gnl|Hg17|chr16 (84269772-84269644) | |
| 396-524, gnl|hg17|chr20 (36677098-36677222) | |
| 396-524, gnl|loxAfr1|scaffold_6531 (119616-119467) | |
| 396-524, gnl|loxAfr1|scaffold_6531 (119594-119472) | |
| 396-524, gnl|mm7|chr8 (119217043-119217192) | |
| 396-524, gnl|mm7|chr8 (119217059-119217183) | |
| 396-524, gnl|Mm7|chr8 (119217181-119217053) | |
| 396-524, gnl|monDom2|scaffold_23 (13993062-13992924) | |
| 396-524, gnl|oryCun1|scaffold_109911 (5537-5689) | |
| 396-524, gnl|oryCun1|scaffold_196846 (6460-6318) | |
| 396-524, gnl|panTro1|chr18 (79190567-79190716) | |
| 396-524, gnl|panTro1|chr21 (39057241-39057365) | |
| 396-524, gnl|rheMac2|chr10 (25838385-25838261) | |
| 396-524, gnl|rheMac2|chr20 (83842683-83842832) | |
| 396-524, gnl|rn3|chr19 (50923723-50923873) | |
| 396-524, gnl|rn3|chr19 (50923739-50923863) | |
| 396-524, gnl|tetNig1|chr5 (4824954-4825110) | |
| 396-524, gnl|tetNig1|chr5 (4824977-4825101) | |
| 396-524, gnl|xenTro1|scaffold_1158 (156937-157079) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-180, gnl|bosTau2|chr18 (12163878-12163694) | |
| 1-180, gnl|Hg17|chr16 (84280095-84279915) | |
| 1-180, gnl|Mm7|chr8 (119224069-119223899) | |
| 396-524, gnl|bosTau2|chr18 (7937965-7937837) | |
| 396-524, gnl|canFam2|chr5 (69996140-69995995) | |
| 396-524, gnl|canFam2|chr5 (69996128-69996004) | |
| 396-524, gnl|danRer3|chr18 (30400569-30400427) | |
| 396-524, gnl|danRer3|chr18 (30400564-30400440) | |
| 396-524, gnl|dasNov1|scaffold_16016 (11705-11559) | |
| 396-524, gnl|dasNov1|scaffold_72000 (4677-4802) | |
| 396-524, gnl|echTel1|scaffold_78134 (985-861) | |
| 396-524, gnl|echTel1|scaffold_78134 (985-861) | |
| 396-524, gnl|fr1|chrUn (122971057-122971213) | |
| 396-524, gnl|fr1|chrUn (122971080-122971204) | |
| 396-524, gnl|galGal2|chr11 (17916774-17916634) | |
| 396-524, gnl|galGal2|chrUn (158176903-158176779) | |
| 396-524, gnl|hg17|chr16 (84269634-84269783) | |
| 396-524, gnl|Hg17|chr16 (84269772-84269644) | |
| 396-524, gnl|hg17|chr20 (36677098-36677222) | |
| 396-524, gnl|loxAfr1|scaffold_6531 (119616-119467) | |
| 396-524, gnl|loxAfr1|scaffold_6531 (119594-119472) | |
| 396-524, gnl|mm7|chr8 (119217043-119217192) | |
| 396-524, gnl|mm7|chr8 (119217059-119217183) | |
| 396-524, gnl|Mm7|chr8 (119217181-119217053) | |
| 396-524, gnl|monDom2|scaffold_23 (13993062-13992924) | |
| 396-524, gnl|oryCun1|scaffold_109911 (5537-5689) | |
| 396-524, gnl|oryCun1|scaffold_196846 (6460-6318) | |
| 396-524, gnl|panTro1|chr18 (79190567-79190716) | |
| 396-524, gnl|panTro1|chr21 (39057241-39057365) | |
| 396-524, gnl|rheMac2|chr10 (25838385-25838261) | |
| 396-524, gnl|rheMac2|chr20 (83842683-83842832) | |
| 396-524, gnl|rn3|chr19 (50923723-50923873) | |
| 396-524, gnl|rn3|chr19 (50923739-50923863) | |
| 396-524, gnl|tetNig1|chr5 (4824954-4825110) | |
| 396-524, gnl|tetNig1|chr5 (4824977-4825101) | |
| 396-524, gnl|xenTro1|scaffold_1158 (156937-157079) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cga (0.279096) | |
| ebs (0.118301) | |
| cty (0.10408) |