Ss1.1-rebs21c_f9.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATGAATTGAGGCACCANGAGATACAAGACGAAAATATTCTCAGTCACTTAGAAGAGGCT CTGAAGATTTTGAGAAAAGGAGCTCTTTTCAGAAGAGGTATCCTGAGGATCGTGATTTCA GAAAGTATGGACACACATCAAAAAGACCCGAAGATGTGGAGAGGTTTGAAAACAGAGAGG CTGCCAGGAGCCCACAGTGGAAGCCCAGGCATTTTCTTCCTCCTTACCAAGAGAAGAAAG ATCAGCGAAACCTCGGACTCCAGACTCATCGACACGCTCCAAGGGAACTCCCAGAGAGCA GTTCAGCAGCCAAGGTATCCTGTGACTATCGCCACAAACATCGTAAGAGCTCAGATGGGG ACCAGGACTTTAATGATGGCAGAACTCAGAAGTACTCTAAAGAGGAAGATAGAAAATTCG GTTCTCAAAAAGGCCCTGTTGCTAGAGAGTCCAGTTGTTCTAATGCCGGAAGAGGGAGAG TGACCGAAGATGGGCAAGTCAAAGAACCTTTGAAGCCATCTAAGAAAGACTGTGCCTCCT CCACCCATTCAAATAAAAGCGATGTTGATTTGAGACCCTGTAATGACAAACGCAAGGACA AAGTAAAAAAAGAAGGGGCTGGCAGAAAAGAGAGCAACTCTTCCCATAACCAACTTGATA AGGGTAAAAAACTTTCCGACATGAAGGCTTCCTCTGCCATTCTTAGGAAGAAATCACTTA CAGTTAAAGTAGATGTGAAGAAAGCAGTGAACACTTCCAGGAAAAGTGAAAACTTTCATC CAGTGTTTGAACATCTTGACTCAACTCAGAATACTGAAAACAAACCTACAGGAGAATTTG CTCAGGAAATCATAACTATAATCCATCAAGTTAAAGCAAATTATTTTCCATCACCCAAAA TTACTCTACATGAGCGTTTCTCACAAATGCAAGATACACAAGCTGCAGATGTAAATGAAA TTAAATTGAACTCAGATCCAGAAATTCACAGGAGAATAGATATGTCTTTGGCTGAGCTTC AGAGTAAACAAACTATGGTATATGATTCAGAACAGACTCTGGTCAAAATAATAGATCCAA ATGACCTACGACATGACATTGAAAGAAGGAGAAAAGAACGGTTACAGAATGAAGATGAGC ACATTTTTCACATAGCTAGTGCTGCAGAGAGGAGTGATCAGCATTCCAATTTTTCAAGGT TGAAGAATACTCATATTGATGGGTTCCAAAAACCTACATGTTTTGTAAAATCAAATTTTA GAAAATTTATTCAGAAACCTTACTTGAATTATCATACTATACAGAGAAAAGATGTCGTTA CTCACAAACCATTTGGAGTTGAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATGAATTGAGGCACCANGAGATACAAGACGAAAATATTCTCAGTCACTTAGAAGAGGCT CTGAAGATTTTGAGAAAAGGAGCTCTTTTCAGAAGAGGTATCCTGAGGATCGTGATTTCA GAAAGTATGGACACACATCAAAAAGACCCGAAGATGTGGAGAGGTTTGAAAACAGAGAGG CTGCCAGGAGCCCACAGTGGAAGCCCAGGCATTTTCTTCCTCCTTACCAAGAGAAGAAAG ATCAGCGAAACCTCGGACTCCAGACTCATCGACACGCTCCAAGGGAACTCCCAGAGAGCA GTTCAGCAGCCAAGGTATCCTGTGACTATCGCCACAAACATCGTAAGAGCTCAGATGGGG ACCAGGACTTTAATGATGGCAGAACTCAGAAGTACTCTAAAGAGGAAGATAGAAAATTCG GTTCTCAAAAAGGCCCTGTTGCTAGAGAGTCCAGTTGTTCTAATGCCGGAAGAGGGAGAG TGACCGAAGATGGGCAAGTCAAAGAACCTTTGAAGCCATCTAAGAAAGACTGTGCCTCCT CCACCCATTCAAATAAAAGCGATGTTGATTTGAGACCCTGTAATGACAAACGCAAGGACA AAGTAAAAAAAGAAGGGGCTGGCAGAAAAGAGAGCAACTCTTCCCATAACCAACTTGATA AGGGTAAAAAACTTTCCGACATGAAGGCTTCCTCTGCCATTCTTAGGAAGAAATCACTTA CAGTTAAAGTAGATGTGAAGAAAGCAGTGAACACTTCCAGGAAAAGTGAAAACTTTCATC CAGTGTTTGAACATCTTGACTCAACTCAGAATACTGAAAACAAACCTACAGGAGAATTTG CTCAGGAAATCATAACTATAATCCATCAAGTTAAAGCAAATTATTTTCCATCACCCAAAA TTACTCTACATGAGCGTTTCTCACAAATGCAAGATACACAAGCTGCAGATGTAAATGAAA TTAAATTGAACTCAGATCCAGAAATTCACAGGAGAATAGATATGTCTTTGGCTGAGCTTC AGAGTAAACAAACTATGGTATATGATTCAGAACAGACTCTGGTCAAAATAATAGATCCAA ATGACCTACGACATGACATTGAAAGAAGGAGAAAAGAACGGTTACAGAATGAAGATGAGC ACATTTTTCACATAGCTAGTGCTGCAGAGAGGAGTGATCAGCATTCCAATTTTTCAAGGT TGAAGAATACTCATATTGATGGGTTCCAAAAACCTACATGTTTTGTAAAATCAAATTTTA GAAAATTTATTCAGAAACCTTACTTGAATTATCATACTATACAGAGAAAAGATGTCGTTA CTCACAAACCATTTGGAGTTGAGG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | More info |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
| 89-761, gnl|bosTau2|chrX (39301121-39301787) | |
| 89-761, gnl|Hg17|chrX (19743490-19742818) | |
| 89-761, gnl|Mm7|chrX (154327597-154328257) | |
| 875-992, gnl|bosTau2|chrX (39311629-39311746) | |
| 875-992, gnl|canFam2|chrX (15823744-15823984) | |
| 875-992, gnl|dasNov1|scaffold_121251 (4064-4302) | |
| 875-992, gnl|echTel1|scaffold_320289 (88859-88618) | |
| 875-992, gnl|galGal2|chr1 (113300585-113300324) | |
| 875-992, gnl|hg17|chrX (19731544-19731781) | |
| 875-992, gnl|Hg17|chrX (19731669-19731552) | |
| 875-992, gnl|loxAfr1|scaffold_172182 (4076-3839) | |
| 875-992, gnl|mm7|chrX (154331930-154331692) | |
| 875-992, gnl|Mm7|chrX (154331803-154331920) | |
| 875-992, gnl|monDom2|scaffold_48 (13910724-13910471) | |
| 875-992, gnl|oryCun1|scaffold_200228 (4408-4643) | |
| 875-992, gnl|panTro1|chrX (20462157-20462394) | |
| 875-992, gnl|rheMac2|chrX (17704152-17704389) | |
| 875-992, gnl|rn3|chrX (56549037-56549252) | |
| 1053-1172, gnl|bosTau2|chrX (39314005-39314124) | |
| 1053-1172, gnl|canFam2|chrX (15821361-15821574) | |
| 1053-1172, gnl|echTel1|scaffold_320289 (93551-93334) | |
| 1053-1172, gnl|galGal2|chr1 (113301800-113301624) | |
| 1053-1172, gnl|hg17|chrX (19728514-19728727) | |
| 1053-1172, gnl|Hg17|chrX (19728646-19728527) | |
| 1053-1172, gnl|mm7|chrX (154334331-154334123) | |
| 1053-1172, gnl|Mm7|chrX (154334197-154334316) | |
| 1053-1172, gnl|monDom2|scaffold_48 (13912405-13912182) | |
| 1053-1172, gnl|oryCun1|scaffold_200228 (891-1106) | |
| 1053-1172, gnl|panTro1|chrX (20459208-20459421) | |
| 1053-1172, gnl|rheMac2|chrX (17699950-17700163) | |
| 1053-1172, gnl|rn3|chrX (56546484-56546694) |
| Aligned organism(s): 31 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 89-761, gnl|bosTau2|chrX (39301121-39301787) | |
| 89-761, gnl|Hg17|chrX (19743490-19742818) | |
| 89-761, gnl|Mm7|chrX (154327597-154328257) | |
| 875-992, gnl|bosTau2|chrX (39311629-39311746) | |
| 875-992, gnl|canFam2|chrX (15823744-15823984) | |
| 875-992, gnl|dasNov1|scaffold_121251 (4064-4302) | |
| 875-992, gnl|echTel1|scaffold_320289 (88859-88618) | |
| 875-992, gnl|galGal2|chr1 (113300585-113300324) | |
| 875-992, gnl|hg17|chrX (19731544-19731781) | |
| 875-992, gnl|Hg17|chrX (19731669-19731552) | |
| 875-992, gnl|loxAfr1|scaffold_172182 (4076-3839) | |
| 875-992, gnl|mm7|chrX (154331930-154331692) | |
| 875-992, gnl|Mm7|chrX (154331803-154331920) | |
| 875-992, gnl|monDom2|scaffold_48 (13910724-13910471) | |
| 875-992, gnl|oryCun1|scaffold_200228 (4408-4643) | |
| 875-992, gnl|panTro1|chrX (20462157-20462394) | |
| 875-992, gnl|rheMac2|chrX (17704152-17704389) | |
| 875-992, gnl|rn3|chrX (56549037-56549252) | |
| 1053-1172, gnl|bosTau2|chrX (39314005-39314124) | |
| 1053-1172, gnl|canFam2|chrX (15821361-15821574) | |
| 1053-1172, gnl|echTel1|scaffold_320289 (93551-93334) | |
| 1053-1172, gnl|galGal2|chr1 (113301800-113301624) | |
| 1053-1172, gnl|hg17|chrX (19728514-19728727) | |
| 1053-1172, gnl|Hg17|chrX (19728646-19728527) | |
| 1053-1172, gnl|mm7|chrX (154334331-154334123) | |
| 1053-1172, gnl|Mm7|chrX (154334197-154334316) | |
| 1053-1172, gnl|monDom2|scaffold_48 (13912405-13912182) | |
| 1053-1172, gnl|oryCun1|scaffold_200228 (891-1106) | |
| 1053-1172, gnl|panTro1|chrX (20459208-20459421) | |
| 1053-1172, gnl|rheMac2|chrX (17699950-17700163) | |
| 1053-1172, gnl|rn3|chrX (56546484-56546694) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fty (0.17584) | |
| ebs (0.118301) |