Non-Coding RNA Search

Ss1.1-rebs21c_j16.5

Sequence:


               
               TAGAAATGTCAACCCATCAAAGACTACAAAGCATTTAGGAAATTTCTTCCCTTGATTTTA
CTAATAGACCAGTATGATTGATAAGTTTCCAGTTAAGGTTGAACTATGGGTGATATTTGG
GTTCTAGTGGCTCATAATGATTACAGTAATTTATGTAAACTACCACTTCTGTTTCTAGCA
TCCTTTGATGAGAGTAGGAATTTCCCCAGGTGTCTGGACAGTTGCTAAGTGTTAGAAATA
TTAAGGTAATTGCATAAATAATAAGAAACCCAACTCCCTACTGAAAAATTGACAAAATAT
ATAGATTTGGGGAGAAAGTAAGTGAATTTTGATCCTCTTTTGGATCCTGAAAAGATAGAG
TAACTTAGGCTATAGTTATTCACTTTTGATATTGGTCCTTAGAAAACATTTAGATTTAGT
GGCAAAGAAGAAATTAAAAGTTTGATCTTGGTACCATGGATGTGACTGAAATCTGGTACT
GATTTCTGGTCTTAATAGCTGGAATGAGGCTTGCAAACTGCTTACTGGAGGGAGCTTGCT
GAACTAAATTTTGAGTCACTAGGACAGTACTTGAGACTTATTTCTGAGGGGTAATAGTTT
CTGCATCTTACTGCATTTTGGAATATGGATTTAAGCCACCCTCCTGCTAGATATTTGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGAAATGTCAACCCATCAAAGACTACAAAGCATTTAGGAAATTTCTTCCCTTGATTTTA
CTAATAGACCAGTATGATTGATAAGTTTCCAGTTAAGGTTGAACTATGGGTGATATTTGG
GTTCTAGTGGCTCATAATGATTACAGTAATTTATGTAAACTACCACTTCTGTTTCTAGCA
TCCTTTGATGAGAGTAGGAATTTCCCCAGGTGTCTGGACAGTTGCTAAGTGTTAGAAATA
TTAAGGTAATTGCATAAATAATAAGAAACCCAACTCCCTACTGAAAAATTGACAAAATAT
ATAGATTTGGGGAGAAAGTAAGTGAATTTTGATCCTCTTTTGGATCCTGAAAAGATAGAG
TAACTTAGGCTATAGTTATTCACTTTTGATATTGGTCCTTAGAAAACATTTAGATTTAGT
GGCAAAGAAGAAATTAAAAGTTTGATCTTGGTACCATGGATGTGACTGAAATCTGGTACT
GATTTCTGGTCTTAATAGCTGGAATGAGGCTTGCAAACTGCTTACTGGAGGGAGCTTGCT
GAACTAAATTTTGAGTCACTAGGACAGTACTTGAGACTTATTTCTGAGGGGTAATAGTTT
CTGCATCTTACTGCATTTTGGAATATGGATTTAAGCCACCCTCCTGCTAGATATTTGGAG

Aligned organism(s): 1 entry(ies)

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Aligned organism(s): 1 entry(ies)

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               22-529, gnl|bosTau2|chr3 (17989721-17989208)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               22-529, gnl|bosTau2|chr3 (17989721-17989208)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ebs (0.236602)
               

               
               ecc (0.23007)
               

               
               kid (0.129735)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.236602)
               

               
               ecc (0.23007)
               

               
               kid (0.129735)