Non-Coding RNA Search

Ss1.1-rebs21c_o13.5

Sequence:


               
               GATTTGACTCACAGCAACATTTCACATAATTGATATTGACACGCACGACATTTATCAGGA
ACATATTATATATTATATAAGATTGAGGGATATCATATTTTCAGCTTTCTTTTAAATAGA
AATTCAGTATATTTTCCTATTTTATATCAAGTAACTAAATTATGCTACTCGTGTGGAAAA
GAGGCGAAGTACACTTTGACAGACATAATCCTTTTGGTGCTCCATCTGATCAAAGTTGAA
AAGTTGATACATTTTTTAAGAGACAGGCTTTCTCACTTCACTGTCTCTGATTTCAGTAGA
ATAATGGTTTAATGTTAGACATTGATGCATCTACTTGGATCAATCAAAGATAAAGTGCAG
TTAAATGGTTAGATGCATCGTTTGTCATCTAAACTTGACCATGGTTTCTACAAAACTGAA
AAACTGACATGAATAGTTTTGGTTTGATTTTTGTTTAAGACTGAAGATTACATATTATTC
TCAATGTTCTAGACAAGAGTAAAATGTAATTCTGGTGGGGTCCAAAGTAGATGTTAGTTG
GGCAAAGATACTATGAATGGAAAGTATTTTAAAACGTAAAATGTTCTGCTTTGTGAATAT
GTAAGTATAGTATAAAGATTTCTTTCATCCCACTTATCCCTCTCCTTTAAAATAAACCAT
AGTTTACAATTGGTAGATCTGTCTATATATAAATATATATTAAAGAGAAAAGATATATAT
CTGAAAATCACCTAAATCTGCTTTATTAGATTACAGTTCACTTATTGCATAGAAACTGGA
CTTGGCTTTACATTCTTAATGTACTTTACTTTTCCTTAAGATATGAACTTAACTCTTTAA
ACTGAATTTTCTTTTACTACTTAAATCATTTATGTATATCTGGTAAATTATGACCAAATT
TTTGTTATAGATTGCGTACAGTAAATTGAAATACACACTTGGTACACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATTTGACTCACAGCAACATTTCACATAATTGATATTGACACGCACGACATTTATCAGGA
ACATATTATATATTATATAAGATTGAGGGATATCATATTTTCAGCTTTCTTTTAAATAGA
AATTCAGTATATTTTCCTATTTTATATCAAGTAACTAAATTATGCTACTCGTGTGGAAAA
GAGGCGAAGTACACTTTGACAGACATAATCCTTTTGGTGCTCCATCTGATCAAAGTTGAA
AAGTTGATACATTTTTTAAGAGACAGGCTTTCTCACTTCACTGTCTCTGATTTCAGTAGA
ATAATGGTTTAATGTTAGACATTGATGCATCTACTTGGATCAATCAAAGATAAAGTGCAG
TTAAATGGTTAGATGCATCGTTTGTCATCTAAACTTGACCATGGTTTCTACAAAACTGAA
AAACTGACATGAATAGTTTTGGTTTGATTTTTGTTTAAGACTGAAGATTACATATTATTC
TCAATGTTCTAGACAAGAGTAAAATGTAATTCTGGTGGGGTCCAAAGTAGATGTTAGTTG
GGCAAAGATACTATGAATGGAAAGTATTTTAAAACGTAAAATGTTCTGCTTTGTGAATAT
GTAAGTATAGTATAAAGATTTCTTTCATCCCACTTATCCCTCTCCTTTAAAATAAACCAT
AGTTTACAATTGGTAGATCTGTCTATATATAAATATATATTAAAGAGAAAAGATATATAT
CTGAAAATCACCTAAATCTGCTTTATTAGATTACAGTTCACTTATTGCATAGAAACTGGA
CTTGGCTTTACATTCTTAATGTACTTTACTTTTCCTTAAGATATGAACTTAACTCTTTAA
ACTGAATTTTCTTTTACTACTTAAATCATTTATGTATATCTGGTAAATTATGACCAAATT
TTTGTTATAGATTGCGTACAGTAAATTGAAATACACACTTGGTACACT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               4-948, gnl|bosTau2|chr14 (24665299-24666235)
               

               
               4-948, gnl|Hg17|chr8 (81595656-81596567)
               

               
               4-948, gnl|Mm7|chr3 (9288716-9289642)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-948, gnl|bosTau2|chr14 (24665299-24666235)
               

               
               4-948, gnl|Hg17|chr8 (81595656-81596567)
               

               
               4-948, gnl|Mm7|chr3 (9288716-9289642)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	4-948, gnl\|bosTau2\|chr14 (24665299-24666235)
	4-948, gnl\|Hg17\|chr8 (81595656-81596567)
	4-948, gnl\|Mm7\|chr3 (9288716-9289642)