Non-Coding RNA Search

Ss1.1-rebs21c_p12.5

Sequence:


               
               TGCTAAGCACCCACTGTCCCCGGCTGGCTGCCCGCCTTGCGCTCAGGAAGGAGCTGCCCC
TACGCACTCATCTGACGTGTCCTGCTCAGCTGCCCAGCTTGTCCTCCCGAGTGTCTGAAC
GAACGACATGCTGACACTGACGACGAGGTCACAACTCACTTTATATTTGTGCCAAGTTAT
CTACTGTATCATGTCTATTCTATCCTTCTCACTCGGCTATTTCCACAGTAATGAAAAAAC
TAGGTTTGGCTTGGAAGTTGATATTCTCAATAGCATGTTGCATGTTTACAAGAGAGAAAT
ATTTGAGCCCTTGCAGAAGAGATTGTGAATTCATCATTAAGGATGGCCTTCAGCCTCTTC
TGACAGCTACTGATGATGTCCCCATTTAAAAATACAACTTCCAAACATCACTACTGGAAA
GAAAAAAAGAAAAAAAAAACGTAGTTAAATATTGACTTTCTGATGGTTGTTTATTTTAAT
TCGGCTGGCTAAGGTATTTCAAGGAACTTAAAGATATTACTTACAAATGAATGTTCAAAT
GAGAAAGAGTTCACCTCCTGCTAGGTTATCCAACCCTAACGTGTTACAGCCTCTCAGGTC
ACCCTTTTATTTCTGTTATTTTAGGATGAAATCACAAAGAAGCATGTGGAATTATTGCCC
CTTGCTATTTGAAGAAAAACTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTAAGCACCCACTGTCCCCGGCTGGCTGCCCGCCTTGCGCTCAGGAAGGAGCTGCCCC
TACGCACTCATCTGACGTGTCCTGCTCAGCTGCCCAGCTTGTCCTCCCGAGTGTCTGAAC
GAACGACATGCTGACACTGACGACGAGGTCACAACTCACTTTATATTTGTGCCAAGTTAT
CTACTGTATCATGTCTATTCTATCCTTCTCACTCGGCTATTTCCACAGTAATGAAAAAAC
TAGGTTTGGCTTGGAAGTTGATATTCTCAATAGCATGTTGCATGTTTACAAGAGAGAAAT
ATTTGAGCCCTTGCAGAAGAGATTGTGAATTCATCATTAAGGATGGCCTTCAGCCTCTTC
TGACAGCTACTGATGATGTCCCCATTTAAAAATACAACTTCCAAACATCACTACTGGAAA
GAAAAAAAGAAAAAAAAAACGTAGTTAAATATTGACTTTCTGATGGTTGTTTATTTTAAT
TCGGCTGGCTAAGGTATTTCAAGGAACTTAAAGATATTACTTACAAATGAATGTTCAAAT
GAGAAAGAGTTCACCTCCTGCTAGGTTATCCAACCCTAACGTGTTACAGCCTCTCAGGTC
ACCCTTTTATTTCTGTTATTTTAGGATGAAATCACAAAGAAGCATGTGGAATTATTGCCC
CTTGCTATTTGAAGAAAAACTACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-520, gnl|bosTau2|chr3 (24606040-24605558)
               

               
               31-520, gnl|Hg17|chr1 (113938854-113939364)
               

               
               31-520, gnl|Mm7|chr3 (103808800-103808347)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-520, gnl|bosTau2|chr3 (24606040-24605558)
               

               
               31-520, gnl|Hg17|chr1 (113938854-113939364)
               

               
               31-520, gnl|Mm7|chr3 (103808800-103808347)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               nco (0.161734)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nco (0.161734)
               

               
               ebs (0.118301)

	31-520, gnl\|bosTau2\|chr3 (24606040-24605558)
	31-520, gnl\|Hg17\|chr1 (113938854-113939364)
	31-520, gnl\|Mm7\|chr3 (103808800-103808347)