Non-Coding RNA Search

Ss1.1-rebs22c_f4.5

Sequence:


               
               GAAACTGAGTTTTAAAGCTCTAACACAGCACACCCTTTGGTGGGTTATCACTGTTTATGT
CCTGCTCTGTGAAGAGCAGCAGCATAAAGTTGCTTGGTTTCATCCTTAATCCTGAAGAAG
AGACACATTTTTATTCAAAGACTCAAATATTTTAGTTAACCACAGGCATGCTATTCCATG
TGAGTTGTGTTGCATATTCTGAAGAAGCAGTTTACTGCCCGTTTCTGCTTCTCTTTTTCC
AAGGGAATCATTCTTATCTGTGTCTGAAAAGCTCTTCTCTACGTTTTACCACAGATTTAT
TTTCTAGATCTATTTATGGGTGTCATCCATTTGCATTCCAGTCGGTAATGCCTTTGAAAT
GCCTCCTCTTCTCTTATGGGTAAATGGACGCCTATTTGACTTATGTAATTGTCAGTAGCT
TTCCAGTTTTTCAAATAGGAGCCATTACTGTCAATGTTATTTTAATTTCAGTATTGCATG
CGCATGGCATTTCTCGAATACCTGGTTTCCTCCCTTTGAGGTTGGAATGTACAGATAACA
AAACCGTTACAGTAGTCCACATTCCAGAACCTCATCCCTGAGCTGGTCCCAGATAGTCCC
CTAGCAGCTGTTGCATGCATCAGTTAGAGAACTGTGTTTTTTCTCTTACTTCCAAAATTG
TTTTATGATATATTGATCAAAAATGATTCTGTTCTTTCTTGTTCTGTCATAGCTTAAGAT
TTAATATTCAGATTTATCTTGGACATCTACCTTGGGGTGGGTAGGTGTCAGTGAATATGA
AGGTTAAAATTACTTTATTCCTGCTTAAAAAGTTAGAAGTAAACTCAGTAGTTCCCAGAG
AGACAGAACGTACAGATAATATTAACCTTTTTTTTTCCCCTGCTTACTACAGTGAACTCC
TGAAACCTAATTCAAAAATTAATCTTTATAAAGTATATGGATTTTCTAGTAAAAACAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAACTGAGTTTTAAAGCTCTAACACAGCACACCCTTTGGTGGGTTATCACTGTTTATGT
CCTGCTCTGTGAAGAGCAGCAGCATAAAGTTGCTTGGTTTCATCCTTAATCCTGAAGAAG
AGACACATTTTTATTCAAAGACTCAAATATTTTAGTTAACCACAGGCATGCTATTCCATG
TGAGTTGTGTTGCATATTCTGAAGAAGCAGTTTACTGCCCGTTTCTGCTTCTCTTTTTCC
AAGGGAATCATTCTTATCTGTGTCTGAAAAGCTCTTCTCTACGTTTTACCACAGATTTAT
TTTCTAGATCTATTTATGGGTGTCATCCATTTGCATTCCAGTCGGTAATGCCTTTGAAAT
GCCTCCTCTTCTCTTATGGGTAAATGGACGCCTATTTGACTTATGTAATTGTCAGTAGCT
TTCCAGTTTTTCAAATAGGAGCCATTACTGTCAATGTTATTTTAATTTCAGTATTGCATG
CGCATGGCATTTCTCGAATACCTGGTTTCCTCCCTTTGAGGTTGGAATGTACAGATAACA
AAACCGTTACAGTAGTCCACATTCCAGAACCTCATCCCTGAGCTGGTCCCAGATAGTCCC
CTAGCAGCTGTTGCATGCATCAGTTAGAGAACTGTGTTTTTTCTCTTACTTCCAAAATTG
TTTTATGATATATTGATCAAAAATGATTCTGTTCTTTCTTGTTCTGTCATAGCTTAAGAT
TTAATATTCAGATTTATCTTGGACATCTACCTTGGGGTGGGTAGGTGTCAGTGAATATGA
AGGTTAAAATTACTTTATTCCTGCTTAAAAAGTTAGAAGTAAACTCAGTAGTTCCCAGAG
AGACAGAACGTACAGATAATATTAACCTTTTTTTTTCCCCTGCTTACTACAGTGAACTCC
TGAAACCTAATTCAAAAATTAATCTTTATAAAGTATATGGATTTTCTAGTAAAAACAATA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-421, gnl|bosTau2|chr29 (23069708-23070132)
               

               
               6-421, gnl|Hg17|chr11 (128396629-128396212)
               

               
               6-421, gnl|Mm7|chr9 (32127963-32128317)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-421, gnl|bosTau2|chr29 (23069708-23070132)
               

               
               6-421, gnl|Hg17|chr11 (128396629-128396212)
               

               
               6-421, gnl|Mm7|chr9 (32127963-32128317)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ebs (0.118301)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ebs (0.118301)

	6-421, gnl\|bosTau2\|chr29 (23069708-23070132)
	6-421, gnl\|Hg17\|chr11 (128396629-128396212)
	6-421, gnl\|Mm7\|chr9 (32127963-32128317)