Non-Coding RNA Search

Ss1.1-rebs23c_e24.5

Sequence:


               
               TCTCACATATAGTTCTCCGTGCTCTATTGTGCCCTGATAGAGATGGAGAAGAGAAAGGGA
TGTTTCTGATGGTGGTTTCAAAGTTTGAACAGTGACTAGCTCAAGCCCATAGAGAGTTGG
TGTCCATAGTTGCCCGTATTTGCTGGTCAATAGCCTTGGTTACTAATGATGACATTCAGT
TCTCTCTCTCTCTTTTTTTTTTTTTTAAACTCAGGTGTAATTATTATCTGTTCTTATAAT
AATTGCAAATATTTTGTGATATCAATTTGTGTGTCTGGCATACCAGTGAAGAGATGAAGA
ACAGTAGATTAATTTAATTTATCTTCGGTAACTTGACTTACTGGGGAGAGACTATCTCTG
GAGTTGAGTACAAGCACAGAAACATCTTTATGGTGGCATCATCTCATTTTTTAGGAAGAC
GTGACAATACTGCCCATCTGACTCATGCGTCACTACTGCTGTTTTCTCCTTTGCTTCCTT
CACCATGATGAACTCTGAACACCCAACCAAGCTCTAACTTCAATGCCATATGGCCTCGTC
CAAGGCTTTGGTGGCATTCCCATATCAGCAAGGGTTGGGCCCTTCCTACAGGACAACTGG
CAGTTTCGTTGGGAAGTCAAATACTACATTCCACCTGGCAGCTCCAGGCAGTCAGCGGGT
TGCCTGGCCCAGAGATGCCCCCTTTCAGCACCCAGAGCAGCCCCCTTTCAGCACCCAGAG
CTGGGCTGGCTGGGATGCATCCTGCTTGGGGCTGGAGCTCATCAAGTTCACACAGGCAGA
TTCCAATCCCATGTAGTCTATAGAAGAAAACGTGTGTTTCTTGATTATTCATTGTTTCAT
TTTAGTTTTCACAAGAGTTTGGAAGCAGACACACTATTGCATTTCTGCCAGCTCTTTCTA
ATCTTTCCAGCTCTCTTTCTCGCTCTCTTTTTAAGGAAAAAAAAAAAAAGATGGGAGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTCACATATAGTTCTCCGTGCTCTATTGTGCCCTGATAGAGATGGAGAAGAGAAAGGGA
TGTTTCTGATGGTGGTTTCAAAGTTTGAACAGTGACTAGCTCAAGCCCATAGAGAGTTGG
TGTCCATAGTTGCCCGTATTTGCTGGTCAATAGCCTTGGTTACTAATGATGACATTCAGT
TCTCTCTCTCTCTTTTTTTTTTTTTTAAACTCAGGTGTAATTATTATCTGTTCTTATAAT
AATTGCAAATATTTTGTGATATCAATTTGTGTGTCTGGCATACCAGTGAAGAGATGAAGA
ACAGTAGATTAATTTAATTTATCTTCGGTAACTTGACTTACTGGGGAGAGACTATCTCTG
GAGTTGAGTACAAGCACAGAAACATCTTTATGGTGGCATCATCTCATTTTTTAGGAAGAC
GTGACAATACTGCCCATCTGACTCATGCGTCACTACTGCTGTTTTCTCCTTTGCTTCCTT
CACCATGATGAACTCTGAACACCCAACCAAGCTCTAACTTCAATGCCATATGGCCTCGTC
CAAGGCTTTGGTGGCATTCCCATATCAGCAAGGGTTGGGCCCTTCCTACAGGACAACTGG
CAGTTTCGTTGGGAAGTCAAATACTACATTCCACCTGGCAGCTCCAGGCAGTCAGCGGGT
TGCCTGGCCCAGAGATGCCCCCTTTCAGCACCCAGAGCAGCCCCCTTTCAGCACCCAGAG
CTGGGCTGGCTGGGATGCATCCTGCTTGGGGCTGGAGCTCATCAAGTTCACACAGGCAGA
TTCCAATCCCATGTAGTCTATAGAAGAAAACGTGTGTTTCTTGATTATTCATTGTTTCAT
TTTAGTTTTCACAAGAGTTTGGAAGCAGACACACTATTGCATTTCTGCCAGCTCTTTCTA
ATCTTTCCAGCTCTCTTTCTCGCTCTCTTTTTAAGGAAAAAAAAAAAAAGATGGGAGGTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-931, gnl|bosTau2|chr11 (23505320-23504417)
               

               
               1-931, gnl|Hg17|chr2 (46325451-46326346)
               

               
               1-931, gnl|Mm7|chr17 (84958935-84959953)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-931, gnl|bosTau2|chr11 (23505320-23504417)
               

               
               1-931, gnl|Hg17|chr2 (46325451-46326346)
               

               
               1-931, gnl|Mm7|chr17 (84958935-84959953)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               fbs (0.350693)
               

               
               eye (0.170503)
               

               
               che (0.136314)
               

               
               pgl (0.118483)
               

               
               ebs (0.118301)
               

               
               cbl (0.114797)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fbs (0.350693)
               

               
               eye (0.170503)
               

               
               che (0.136314)
               

               
               pgl (0.118483)
               

               
               ebs (0.118301)
               

               
               cbl (0.114797)

	1-931, gnl\|bosTau2\|chr11 (23505320-23504417)
	1-931, gnl\|Hg17\|chr2 (46325451-46326346)
	1-931, gnl\|Mm7\|chr17 (84958935-84959953)

	fbs (0.350693)
	eye (0.170503)
	che (0.136314)
	pgl (0.118483)
	ebs (0.118301)
	cbl (0.114797)