Ss1.1-rebs23c_h17.5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCTGCCGCGGGAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGCCCAGCGACGTATGG ATCGTCACCTACCCCAAGTCCGGCACGAGCTTGCTGCAGGAGGTGGTCTACCTGGTGAGC CAGGGGGCCGACCCCGACGAGATCGGCCTGATGAACATCGACGAGCAGCTCCCGGTCCTG GAGTACCCGCAGCCGGGCCTGGACATCATCAAGGAACTGACGTCTCCCCGCCTCATCAAA AGCCACCTCCCCTACCGCTTCCTGCCCTCCGACCTCCACAACGGCGACTCCAAGGTCATA TACATGGCTCGGAACCCCAAGGACCTGGTGGTGTCCTATTACCAGTTCCACCGCTCCCTG CGGACCATGAGCTACCGGGGCACCTTCCAGGAGTTCTGCCGGCGGTTCATGAATGACAAG TTGGGCTACGGCTCCTGGTTCGAGCACGTGCAGGAGTTCTGGGAGCACCGCATGGACTCC AACGTGCTCTTCCTCAAGTACGAAGACATGCACCGGGACCTGGTGACGATGGTGGAACAG CTGGCCAGATTCCTGGGGGTGTCCTGCGATAAGGCCCAGCTGGAGTCCCTGATCGAGCAC TGCCACCAACTGGTGGACCAGTGCTGCAACGCCGAGGCCCTCCCCGTGGGTCGGGGACGA GTCGGGCTCTGGAAGGACATCTTCACTGTCTCCATGAACGAGAAGTTCGACCTGGTGTAT AAACAGAAGATGGGGAAGTGTGACCTCACGTTTGACTTTTACCTATAGCAGCAGCAACAG CAAACTTGCATGCTCGCAGTACCCAGACACTATAGCTCAAGTCCCGTGTGCACCCATCTG TTACTTGCTGGGCAAACTGGAAGCGGCGCGCGACACCGGGGAGGGAGGGAGACGGCCGGG AGGCCGCGGGGAGTGGGCTTCTCTCCGTCCGGAGCAGCCGCCTCGGCTTTGGAGTTCGGC GTCTGCACGTCTGATCACAGAGATGGCGCTTCTGATGGCCTGGACCATGCCTGTCACGCC TGTGACATATGCAACTAGAATGTCTACCTTTTACAACCCACATGACTTACTGTATTTTAT AGAGCTTTTCACGGGAAATCTAAATAAATGTCAGTCAACCAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCTGCCGCGGGAAGATGGAGGAGATCGCCAACTTCCCGGTGCGGCCCAGCGACGTATGG ATCGTCACCTACCCCAAGTCCGGCACGAGCTTGCTGCAGGAGGTGGTCTACCTGGTGAGC CAGGGGGCCGACCCCGACGAGATCGGCCTGATGAACATCGACGAGCAGCTCCCGGTCCTG GAGTACCCGCAGCCGGGCCTGGACATCATCAAGGAACTGACGTCTCCCCGCCTCATCAAA AGCCACCTCCCCTACCGCTTCCTGCCCTCCGACCTCCACAACGGCGACTCCAAGGTCATA TACATGGCTCGGAACCCCAAGGACCTGGTGGTGTCCTATTACCAGTTCCACCGCTCCCTG CGGACCATGAGCTACCGGGGCACCTTCCAGGAGTTCTGCCGGCGGTTCATGAATGACAAG TTGGGCTACGGCTCCTGGTTCGAGCACGTGCAGGAGTTCTGGGAGCACCGCATGGACTCC AACGTGCTCTTCCTCAAGTACGAAGACATGCACCGGGACCTGGTGACGATGGTGGAACAG CTGGCCAGATTCCTGGGGGTGTCCTGCGATAAGGCCCAGCTGGAGTCCCTGATCGAGCAC TGCCACCAACTGGTGGACCAGTGCTGCAACGCCGAGGCCCTCCCCGTGGGTCGGGGACGA GTCGGGCTCTGGAAGGACATCTTCACTGTCTCCATGAACGAGAAGTTCGACCTGGTGTAT AAACAGAAGATGGGGAAGTGTGACCTCACGTTTGACTTTTACCTATAGCAGCAGCAACAG CAAACTTGCATGCTCGCAGTACCCAGACACTATAGCTCAAGTCCCGTGTGCACCCATCTG TTACTTGCTGGGCAAACTGGAAGCGGCGCGCGACACCGGGGAGGGAGGGAGACGGCCGGG AGGCCGCGGGGAGTGGGCTTCTCTCCGTCCGGAGCAGCCGCCTCGGCTTTGGAGTTCGGC GTCTGCACGTCTGATCACAGAGATGGCGCTTCTGATGGCCTGGACCATGCCTGTCACGCC TGTGACATATGCAACTAGAATGTCTACCTTTTACAACCCACATGACTTACTGTATTTTAT AGAGCTTTTCACGGGAAATCTAAATAAATGTCAGTCAACCAAAAAAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 82-214, gnl|bosTau2|chr5 (72223145-72223277) | |
| 82-214, gnl|canFam2|chr10 (24862828-24862692) | |
| 82-214, gnl|danRer3|chr6 (31361343-31361478) | |
| 82-214, gnl|fr1|chrUn (285238991-285239126) | |
| 82-214, gnl|galGal2|chr1 (65616596-65616732) | |
| 82-214, gnl|hg17|chr22 (42562581-42562717) | |
| 82-214, gnl|Hg17|chr22 (42562714-42562582) | |
| 82-214, gnl|loxAfr1|scaffold_153611 (1636-1772) | |
| 82-214, gnl|mm7|chr15 (84174609-84174745) | |
| 82-214, gnl|Mm7|chr15 (84174742-84174610) | |
| 82-214, gnl|monDom2|scaffold_119 (2115311-2115175) | |
| 82-214, gnl|panTro1|chr23 (42858924-42859060) | |
| 82-214, gnl|rheMac2|chr10 (87843844-87843980) | |
| 82-214, gnl|tetNig1|chrUn_random (48571762-48571627) | |
| 82-214, gnl|xenTro1|scaffold_1022 (138562-138698) | |
| 293-421, gnl|bosTau2|chr5 (72226182-72226310) | |
| 293-421, gnl|Hg17|chr22 (42559776-42559648) | |
| 293-421, gnl|Mm7|chr15 (84172408-84172280) | |
| 637-1128, gnl|bosTau2|chr5 (72269775-72270262) | |
| 637-1128, gnl|Hg17|chr22 (42546914-42546410) | |
| 637-1128, gnl|Mm7|chr15 (84159927-84159461) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 82-214, gnl|bosTau2|chr5 (72223145-72223277) | |
| 82-214, gnl|canFam2|chr10 (24862828-24862692) | |
| 82-214, gnl|danRer3|chr6 (31361343-31361478) | |
| 82-214, gnl|fr1|chrUn (285238991-285239126) | |
| 82-214, gnl|galGal2|chr1 (65616596-65616732) | |
| 82-214, gnl|hg17|chr22 (42562581-42562717) | |
| 82-214, gnl|Hg17|chr22 (42562714-42562582) | |
| 82-214, gnl|loxAfr1|scaffold_153611 (1636-1772) | |
| 82-214, gnl|mm7|chr15 (84174609-84174745) | |
| 82-214, gnl|Mm7|chr15 (84174742-84174610) | |
| 82-214, gnl|monDom2|scaffold_119 (2115311-2115175) | |
| 82-214, gnl|panTro1|chr23 (42858924-42859060) | |
| 82-214, gnl|rheMac2|chr10 (87843844-87843980) | |
| 82-214, gnl|tetNig1|chrUn_random (48571762-48571627) | |
| 82-214, gnl|xenTro1|scaffold_1022 (138562-138698) | |
| 293-421, gnl|bosTau2|chr5 (72226182-72226310) | |
| 293-421, gnl|Hg17|chr22 (42559776-42559648) | |
| 293-421, gnl|Mm7|chr15 (84172408-84172280) | |
| 637-1128, gnl|bosTau2|chr5 (72269775-72270262) | |
| 637-1128, gnl|Hg17|chr22 (42546914-42546410) | |
| 637-1128, gnl|Mm7|chr15 (84159927-84159461) |
| Expressed library(ies): 7 entry(ies) | More info |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
| fcc (0.791139) | |
| ebs (0.236602) | |
| ecc (0.23007) | |
| ece (0.229305) | |
| fhi (0.169578) | |
| fco (0.157208) | |
| cbr (0.127975) |
| Expressed library(ies): 7 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fcc (0.791139) | |
| ebs (0.236602) | |
| ecc (0.23007) | |
| ece (0.229305) | |
| fhi (0.169578) | |
| fco (0.157208) | |
| cbr (0.127975) |