Ss1.1-rebs23c_h19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CTTGGGCGGCCTCTGCAGCAGTACAACTCGCCTTACTCGCTGCTTGGCGAGCATGGATCC CCGAAGAAAAGCCGTTCTAGGCATGGATAGACTTCGAGTTCTTCTGATGCTGTTCCATAC AGTGGCTCGAATCATGGCAGAACAAGAAGTGGAAAATCTCTCAGGCCTTTCGACTAACCC TGAGAAAGATATATTTGTGGTGCGGGAAAATGGGACGACGTGTCTCATGGCAGAGTTTGC AGCCAAATTTATTGTCCCTTATGATGTGTGGGCCAGCAATTATGTGGATCTAATCACGGA ACAGGCTGATATCTCACTGACCCGGGGAGCTGAGGTGAAGGGCCGCTGTGGCCACAACGA GTCAGAGCTGCAGGTGTTCTGGGTGGATCGCGCCTACTCACTCAAAATGTTGTTTGTAAA GGAAAGTCACAACACGTCCAAGGGACCGGAAGCGACCTGGAGGCTAAGCAAGGTCCAATT TGTCTATGACTCCTCGGAGAAGACCCATTTTAAAGACGCGGTCAGTGCCGGGAAGCACAC AGCCAACTCGCATCACCTCTCGGCCTTGGTCACCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CTTGGGCGGCCTCTGCAGCAGTACAACTCGCCTTACTCGCTGCTTGGCGAGCATGGATCC CCGAAGAAAAGCCGTTCTAGGCATGGATAGACTTCGAGTTCTTCTGATGCTGTTCCATAC AGTGGCTCGAATCATGGCAGAACAAGAAGTGGAAAATCTCTCAGGCCTTTCGACTAACCC TGAGAAAGATATATTTGTGGTGCGGGAAAATGGGACGACGTGTCTCATGGCAGAGTTTGC AGCCAAATTTATTGTCCCTTATGATGTGTGGGCCAGCAATTATGTGGATCTAATCACGGA ACAGGCTGATATCTCACTGACCCGGGGAGCTGAGGTGAAGGGCCGCTGTGGCCACAACGA GTCAGAGCTGCAGGTGTTCTGGGTGGATCGCGCCTACTCACTCAAAATGTTGTTTGTAAA GGAAAGTCACAACACGTCCAAGGGACCGGAAGCGACCTGGAGGCTAAGCAAGGTCCAATT TGTCTATGACTCCTCGGAGAAGACCCATTTTAAAGACGCGGTCAGTGCCGGGAAGCACAC AGCCAACTCGCATCACCTCTCGGCCTTGGTCACCCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 1-116, gnl|bosTau2|chr13 (775800-775916) | |
| 1-116, gnl|canFam2|chr24 (15691700-15691439) | |
| 1-116, gnl|dasNov1|scaffold_204 (169294-169054) | |
| 1-116, gnl|hg17|chr20 (9443367-9443624) | |
| 1-116, gnl|Hg17|chr20 (9443448-9443563) | |
| 1-116, gnl|loxAfr1|scaffold_2544 (127655-127401) | |
| 1-116, gnl|mm7|chr2 (135799046-135799289) | |
| 1-116, gnl|Mm7|chr2 (135799114-135799229) | |
| 1-116, gnl|monDom2|scaffold_1 (41433446-41433693) | |
| 1-116, gnl|oryCun1|scaffold_198547 (97269-97028) | |
| 1-116, gnl|panTro1|chr21 (9332866-9333123) | |
| 1-116, gnl|rheMac2|chr10 (42823311-42823569) | |
| 1-116, gnl|rn3|chr3 (124031846-124032086) | |
| 117-293, gnl|bosTau2|chr13 (776447-776623) | |
| 117-293, gnl|Hg17|chr20 (9444100-9444276) | |
| 117-293, gnl|Mm7|chr2 (135799799-135799975) | |
| 420-527, gnl|bosTau2|chr13 (777249-777356) | |
| 420-527, gnl|canFam2|chr24 (15690143-15690004) | |
| 420-527, gnl|dasNov1|scaffold_204 (167906-167771) | |
| 420-527, gnl|echTel1|scaffold_292670 (9380-9240) | |
| 420-527, gnl|fr1|chrUn (180751036-180751142) | |
| 420-527, gnl|galGal2|chr14 (18284889-18285038) | |
| 420-527, gnl|hg17|chr20 (9444901-9445041) | |
| 420-527, gnl|Hg17|chr20 (9444901-9445008) | |
| 420-527, gnl|loxAfr1|scaffold_2544 (126168-126028) | |
| 420-527, gnl|mm7|chr2 (135800601-135800727) | |
| 420-527, gnl|Mm7|chr2 (135800601-135800708) | |
| 420-527, gnl|monDom2|scaffold_1 (41435316-41435450) | |
| 420-527, gnl|oryCun1|scaffold_198547 (95751-95611) | |
| 420-527, gnl|panTro1|chr21 (9334406-9334546) | |
| 420-527, gnl|rheMac2|chr10 (42824866-42825006) | |
| 420-527, gnl|rn3|chr3 (124033414-124033541) | |
| 420-527, gnl|tetNig1|chr14 (7329410-7329295) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-116, gnl|bosTau2|chr13 (775800-775916) | |
| 1-116, gnl|canFam2|chr24 (15691700-15691439) | |
| 1-116, gnl|dasNov1|scaffold_204 (169294-169054) | |
| 1-116, gnl|hg17|chr20 (9443367-9443624) | |
| 1-116, gnl|Hg17|chr20 (9443448-9443563) | |
| 1-116, gnl|loxAfr1|scaffold_2544 (127655-127401) | |
| 1-116, gnl|mm7|chr2 (135799046-135799289) | |
| 1-116, gnl|Mm7|chr2 (135799114-135799229) | |
| 1-116, gnl|monDom2|scaffold_1 (41433446-41433693) | |
| 1-116, gnl|oryCun1|scaffold_198547 (97269-97028) | |
| 1-116, gnl|panTro1|chr21 (9332866-9333123) | |
| 1-116, gnl|rheMac2|chr10 (42823311-42823569) | |
| 1-116, gnl|rn3|chr3 (124031846-124032086) | |
| 117-293, gnl|bosTau2|chr13 (776447-776623) | |
| 117-293, gnl|Hg17|chr20 (9444100-9444276) | |
| 117-293, gnl|Mm7|chr2 (135799799-135799975) | |
| 420-527, gnl|bosTau2|chr13 (777249-777356) | |
| 420-527, gnl|canFam2|chr24 (15690143-15690004) | |
| 420-527, gnl|dasNov1|scaffold_204 (167906-167771) | |
| 420-527, gnl|echTel1|scaffold_292670 (9380-9240) | |
| 420-527, gnl|fr1|chrUn (180751036-180751142) | |
| 420-527, gnl|galGal2|chr14 (18284889-18285038) | |
| 420-527, gnl|hg17|chr20 (9444901-9445041) | |
| 420-527, gnl|Hg17|chr20 (9444901-9445008) | |
| 420-527, gnl|loxAfr1|scaffold_2544 (126168-126028) | |
| 420-527, gnl|mm7|chr2 (135800601-135800727) | |
| 420-527, gnl|Mm7|chr2 (135800601-135800708) | |
| 420-527, gnl|monDom2|scaffold_1 (41435316-41435450) | |
| 420-527, gnl|oryCun1|scaffold_198547 (95751-95611) | |
| 420-527, gnl|panTro1|chr21 (9334406-9334546) | |
| 420-527, gnl|rheMac2|chr10 (42824866-42825006) | |
| 420-527, gnl|rn3|chr3 (124033414-124033541) | |
| 420-527, gnl|tetNig1|chr14 (7329410-7329295) |
| Expressed library(ies): 3 entry(ies) | More info |
| Expressed library(ies): 3 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.236602) | |
| fcc (0.197785) | |
| eje (0.0988338) |