Ss1.1-rebs25c_f23.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
CCAGGCAACACAACGAAGTTTTTTTTTTCCTGTGATATTTCTTCTTTTTCTCTTTTTTCC TCTTCTTCCTCCTCCTCCTGATCTTCCTCCTCCTCCTCCACCTCCTCCTCCCCCCTCCCC TCCTCCTCCTCCTCCTCTTCGGTCCTCCTTTCCCCCTCTTTCTCTTCTCTTCCCCTCAGT TGGGAAAAAAAAAAAAAAAACCCAAAAGAAAAAGAAAAAGAAGAAAAAGAAGAAAAAAAA ATTGTCAAGCCCCCGAACTGAAGGTTACGAGCGGCCCGTCAGCAGCCCACATGTAACCGA ACTGTCGTGTTTCATGGCTTTTTGCCACTCCAGCTGTCAATCAAAGCCCGGAATGTCAAG GTAGTGAATGAATGATGGTTGATGATGATGAAGAGG |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
CCAGGCAACACAACGAAGTTTTTTTTTTCCTGTGATATTTCTTCTTTTTCTCTTTTTTCC TCTTCTTCCTCCTCCTCCTGATCTTCCTCCTCCTCCTCCACCTCCTCCTCCCCCCTCCCC TCCTCCTCCTCCTCCTCTTCGGTCCTCCTTTCCCCCTCTTTCTCTTCTCTTCCCCTCAGT TGGGAAAAAAAAAAAAAAAACCCAAAAGAAAAAGAAAAAGAAGAAAAAGAAGAAAAAAAA ATTGTCAAGCCCCCGAACTGAAGGTTACGAGCGGCCCGTCAGCAGCCCACATGTAACCGA ACTGTCGTGTTTCATGGCTTTTTGCCACTCCAGCTGTCAATCAAAGCCCGGAATGTCAAG GTAGTGAATGAATGATGGTTGATGATGATGAAGAGG |
Predicted RNA structure(s): 1 entry(ies) | More info |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
150-269, - strand, RNAz p=0.994019 |
Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
150-269, - strand, RNAz p=0.994019 |
Predicted microRNA(s): 1 entry(ies) | More info |
Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
145-256, - strand, RNAmicro p=0.999974 |
Homologous human UTR: 1 entry(ies) | More info |
Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
3' of NM_020149, - |
Aligned organism(s): 3 entry(ies) | More info |
Aligned organism(s): 3 entry(ies) | Help | Less info |
31-396, gnl|bosTau2|chr10 (18804581-18804928) | |
31-396, gnl|Hg17|chr15 (35179148-35179496) | |
31-396, gnl|Mm7|chr2 (115805842-115806174) |
Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
31-396, gnl|bosTau2|chr10 (18804581-18804928) | |
31-396, gnl|Hg17|chr15 (35179148-35179496) | |
31-396, gnl|Mm7|chr2 (115805842-115806174) |
Expressed library(ies): 1 entry(ies) | More info |
Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
ebs (0.236602) |