Non-Coding RNA Search

Ss1.1-rebs25c_i4.5

Sequence:


               
               TTAAAATGAAGAAAAAAAGAAAATCTTATGTACAAAACCAAGGGGTGTTTTTAGAACCTT
GTGTAGAAATAAATTCGTGTAAAAGGATCAGAGGCAGTGGAGCTACTGATGTGAGTGAGC
ATGGGAAACAGCTGTTGGGGGAGAGAGTCAAGGCTGGTACTGAGGATATGCAGTAAGAGT
GTGTGAATGTGCAGAACGAATGCTGTGTGTTGGGGCTGCATGCATATCCCCAGCCATGGA
GGGGTACAGCTTCCATATTTCTGCAGTGAAAGCTTGGTTTATGAAGGTTTCTACACACAC
ATCCTGTCGTGAGGACTGTGTTGGCCTAATAATGTGAGAACAGGGTCTCAAGGCACGTGT
CACTGTCAAGACGGCCACAAAACTCCGTATCAAAGAAATGGAAGCACAGCCTTCTGGAAG
GAACTGCACTCCTGCCAGAGCATCCCTGGGCTCAGTGCTGCTTCCACTTGGCACATCCTG
TGGCACCTAAATCCAGAGGTTTCCAGTGGTGGAGGTCATAACCTGGATTGAAGGACACCG
CACAGTTGTAGTGCTGAGGAATAGAGTGTGGTCGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAAATGAAGAAAAAAAGAAAATCTTATGTACAAAACCAAGGGGTGTTTTTAGAACCTT
GTGTAGAAATAAATTCGTGTAAAAGGATCAGAGGCAGTGGAGCTACTGATGTGAGTGAGC
ATGGGAAACAGCTGTTGGGGGAGAGAGTCAAGGCTGGTACTGAGGATATGCAGTAAGAGT
GTGTGAATGTGCAGAACGAATGCTGTGTGTTGGGGCTGCATGCATATCCCCAGCCATGGA
GGGGTACAGCTTCCATATTTCTGCAGTGAAAGCTTGGTTTATGAAGGTTTCTACACACAC
ATCCTGTCGTGAGGACTGTGTTGGCCTAATAATGTGAGAACAGGGTCTCAAGGCACGTGT
CACTGTCAAGACGGCCACAAAACTCCGTATCAAAGAAATGGAAGCACAGCCTTCTGGAAG
GAACTGCACTCCTGCCAGAGCATCCCTGGGCTCAGTGCTGCTTCCACTTGGCACATCCTG
TGGCACCTAAATCCAGAGGTTTCCAGTGGTGGAGGTCATAACCTGGATTGAAGGACACCG
CACAGTTGTAGTGCTGAGGAATAGAGTGTGGTCGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-576, gnl|bosTau2|chr5 (61392145-61391585)
               

               
               1-576, gnl|Hg17|chr12 (6645992-6645421)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-576, gnl|bosTau2|chr5 (61392145-61391585)
               

               
               1-576, gnl|Hg17|chr12 (6645992-6645421)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fce (0.271592)
               

               
               ebs (0.118301)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               ebs (0.118301)

	1-576, gnl\|bosTau2\|chr5 (61392145-61391585)
	1-576, gnl\|Hg17\|chr12 (6645992-6645421)