Ss1.1-rebs25c_j5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGTGCACAGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCACGCGCATGTCC ATTGCACAAGTCCACTTACTCGTGTGTGTGGAGGGAAGGAAGCATGAGTGTGCACCAGCA TGACGTGCCACACGTGTGTGCAGGGAGGCGTGTGCGCTGCAGTGCATGTAACCAGCCTGG GCCTTGGCACGCATCCACCTGCCCACTGGTGTGGAAGAGGTTGGCGTGGGAGGGTGCTCA GGACATGTGTGTGCAGCTGTGAGACCTGTATGCGTGTGGACAGAGGGGTGTACGTGGAGG CATGTGAGCTGCGTGTGCAGGTGTGTGTGTGTGTGCACGTGAGTGTACACCCCGAGGGTG GGAGCACCTGCGTGTGTTCCATTGTCCCTGCACCACTCGCTCCGGCTCCCCTCCAGAGCC CCCAGCCCCTCGGCCCTCTCAGACCTGCAGCACGTCAAGGCCCCCTCAGCTGCATGCGCC TCGCTGCTCTGTCCATCAGTGTGTGCTTGACCAAGAGAAAACCAAGACGTCTGGGGGGAC CTCTGTACCTGGTCTCCCTAGCCCCCGCCCACTGTGCTGTGTTACTCGCATGGGGGGTTT CTCTCCCACCCCTTCCACAATATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGTGCACAGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCACGCGCATGTCC ATTGCACAAGTCCACTTACTCGTGTGTGTGGAGGGAAGGAAGCATGAGTGTGCACCAGCA TGACGTGCCACACGTGTGTGCAGGGAGGCGTGTGCGCTGCAGTGCATGTAACCAGCCTGG GCCTTGGCACGCATCCACCTGCCCACTGGTGTGGAAGAGGTTGGCGTGGGAGGGTGCTCA GGACATGTGTGTGCAGCTGTGAGACCTGTATGCGTGTGGACAGAGGGGTGTACGTGGAGG CATGTGAGCTGCGTGTGCAGGTGTGTGTGTGTGTGCACGTGAGTGTACACCCCGAGGGTG GGAGCACCTGCGTGTGTTCCATTGTCCCTGCACCACTCGCTCCGGCTCCCCTCCAGAGCC CCCAGCCCCTCGGCCCTCTCAGACCTGCAGCACGTCAAGGCCCCCTCAGCTGCATGCGCC TCGCTGCTCTGTCCATCAGTGTGTGCTTGACCAAGAGAAAACCAAGACGTCTGGGGGGAC CTCTGTACCTGGTCTCCCTAGCCCCCGCCCACTGTGCTGTGTTACTCGCATGGGGGGTTT CTCTCCCACCCCTTCCACAATATG |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 292-624, gnl|bosTau2|chr19 (33436360-33436697) | |
| 292-624, gnl|canFam2|chr9 (26994126-26993507) | |
| 292-624, gnl|canFam2|chr9 (26993507-26994126) | |
| 292-624, gnl|canFam2|chr9 (26994126-26993507) | |
| 292-624, gnl|canFam2|chr9 (26994126-26993507) | |
| 292-624, gnl|echTel1|scaffold_215046 (3370-3995) | |
| 292-624, gnl|echTel1|scaffold_215046 (3995-3378) | |
| 292-624, gnl|echTel1|scaffold_215046 (3370-3995) | |
| 292-624, gnl|echTel1|scaffold_215046 (3370-3995) | |
| 292-624, gnl|hg17|chr16 (33595946-33596559) | |
| 292-624, gnl|hg17|chr16 (31942623-31943236) | |
| 292-624, gnl|hg17|chr16 (32886187-32886800) | |
| 292-624, gnl|hg17|chr17 (33939697-33940310) | |
| 292-624, gnl|Hg17|chr17 (33940506-33940108) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (4281-3660) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (3662-4281) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (4281-3662) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (4281-3662) | |
| 292-624, gnl|mm7|chr11 (97618305-97618902) | |
| 292-624, gnl|mm7|chr11 (97618902-97618305) | |
| 292-624, gnl|mm7|chr11 (97618305-97618902) | |
| 292-624, gnl|mm7|chr11 (97618305-97618902) | |
| 292-624, gnl|Mm7|chr11 (97619074-97618695) | |
| 292-624, gnl|monDom2|scaffold_18 (47383800-47384422) | |
| 292-624, gnl|monDom2|scaffold_18 (47384422-47383800) | |
| 292-624, gnl|monDom2|scaffold_18 (47383800-47384422) | |
| 292-624, gnl|monDom2|scaffold_18 (47383800-47384422) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3953-3401) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3401-3953) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3953-3401) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3953-3401) | |
| 292-624, gnl|panTro1|chr19 (37155044-37155658) | |
| 292-624, gnl|panTro1|chr19 (37155658-37155044) | |
| 292-624, gnl|panTro1|chr19 (37155044-37155658) | |
| 292-624, gnl|panTro1|chr19 (37155044-37155658) | |
| 292-624, gnl|rn3|chr10 (86269362-86269967) | |
| 292-624, gnl|rn3|chr10 (86269967-86269362) | |
| 292-624, gnl|rn3|chr10 (86269362-86269967) | |
| 292-624, gnl|rn3|chr10 (86269362-86269967) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 292-624, gnl|bosTau2|chr19 (33436360-33436697) | |
| 292-624, gnl|canFam2|chr9 (26994126-26993507) | |
| 292-624, gnl|canFam2|chr9 (26993507-26994126) | |
| 292-624, gnl|canFam2|chr9 (26994126-26993507) | |
| 292-624, gnl|canFam2|chr9 (26994126-26993507) | |
| 292-624, gnl|echTel1|scaffold_215046 (3370-3995) | |
| 292-624, gnl|echTel1|scaffold_215046 (3995-3378) | |
| 292-624, gnl|echTel1|scaffold_215046 (3370-3995) | |
| 292-624, gnl|echTel1|scaffold_215046 (3370-3995) | |
| 292-624, gnl|hg17|chr16 (33595946-33596559) | |
| 292-624, gnl|hg17|chr16 (31942623-31943236) | |
| 292-624, gnl|hg17|chr16 (32886187-32886800) | |
| 292-624, gnl|hg17|chr17 (33939697-33940310) | |
| 292-624, gnl|Hg17|chr17 (33940506-33940108) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (4281-3660) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (3662-4281) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (4281-3662) | |
| 292-624, gnl|loxAfr1|scaffold_133851 (4281-3662) | |
| 292-624, gnl|mm7|chr11 (97618305-97618902) | |
| 292-624, gnl|mm7|chr11 (97618902-97618305) | |
| 292-624, gnl|mm7|chr11 (97618305-97618902) | |
| 292-624, gnl|mm7|chr11 (97618305-97618902) | |
| 292-624, gnl|Mm7|chr11 (97619074-97618695) | |
| 292-624, gnl|monDom2|scaffold_18 (47383800-47384422) | |
| 292-624, gnl|monDom2|scaffold_18 (47384422-47383800) | |
| 292-624, gnl|monDom2|scaffold_18 (47383800-47384422) | |
| 292-624, gnl|monDom2|scaffold_18 (47383800-47384422) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3953-3401) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3401-3953) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3953-3401) | |
| 292-624, gnl|oryCun1|scaffold_117999 (3953-3401) | |
| 292-624, gnl|panTro1|chr19 (37155044-37155658) | |
| 292-624, gnl|panTro1|chr19 (37155658-37155044) | |
| 292-624, gnl|panTro1|chr19 (37155044-37155658) | |
| 292-624, gnl|panTro1|chr19 (37155044-37155658) | |
| 292-624, gnl|rn3|chr10 (86269362-86269967) | |
| 292-624, gnl|rn3|chr10 (86269967-86269362) | |
| 292-624, gnl|rn3|chr10 (86269362-86269967) | |
| 292-624, gnl|rn3|chr10 (86269362-86269967) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| fce (0.271592) | |
| ebs (0.236602) | |
| fbs (0.175346) | |
| hyp (0.142837) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| fce (0.271592) | |
| ebs (0.236602) | |
| fbs (0.175346) | |
| hyp (0.142837) |