Ss1.1-rebs26c_b6.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGGGGAGGAGGCTGAGGACAAGGCCGGGCCTCCCGGGGGCAGGGGCACAGGCCCTGCGG CGCTGGACGCCTCGCTGGTGTACGACGCGGGCAAGTACACGCTCGTGGGGGACGAGCACA CGCAGCTGGAGCTGGTGAGCCTGCGGCGCTGCGCCGGGCTGGGCGACGACAGCGAGGAAT ACAGCGGCGGCGGAGGCCAGCGAGGAGGAGGCGGGCGCGGCACTCCTGGGTGGTGGACAG AGAGCCGAGGACACCTCCCCAGACAGCCCGGAGCTCACCTTCTCCAAGAAGTTCCTCAAT GTCTTTGTCAACAGCACCTCTCGATCTTCCAGCACCGAGTCTTTCGGCCTTTTTTCCTGC CTGGTCAACGGCGAGGAGAGAGAGCAAACCCATCGGGCCGTCTTCAGGTTCATTCCCCGC CATCCGGACGAGCTGGAGCTGGATGTGGATGACCCGGTGCTGGTGGAGGCTGAGGAGGAT GACTTCTGGTTCCGAGGCTTCAACATGCGCACAGGGGAGCGGGGTGTCTTCCCTGCCTTC TACGCCCACGCGGTGCCCGGCCCGGCCAAGGACCTGCTGGGGAGCAAGCGGGGTCCCTGC TGGGTGGAGCGCTTCGACGTCCAGTTCCTGGGCTCCGTGGAGGTACCCTGTCACCAGGGC AACGGTATCCTCTGTGCAGCCATGCAGAAGATGGCCACTGCCCGAAAACTGACTGTCCAC CTGCGTCCTCCTGCCTCCTGTGACCTTGAGATTTCTCTTCGGGGGGTCAAGCTGAGTCTA AGTGGAGGACCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGGGGAGGAGGCTGAGGACAAGGCCGGGCCTCCCGGGGGCAGGGGCACAGGCCCTGCGG CGCTGGACGCCTCGCTGGTGTACGACGCGGGCAAGTACACGCTCGTGGGGGACGAGCACA CGCAGCTGGAGCTGGTGAGCCTGCGGCGCTGCGCCGGGCTGGGCGACGACAGCGAGGAAT ACAGCGGCGGCGGAGGCCAGCGAGGAGGAGGCGGGCGCGGCACTCCTGGGTGGTGGACAG AGAGCCGAGGACACCTCCCCAGACAGCCCGGAGCTCACCTTCTCCAAGAAGTTCCTCAAT GTCTTTGTCAACAGCACCTCTCGATCTTCCAGCACCGAGTCTTTCGGCCTTTTTTCCTGC CTGGTCAACGGCGAGGAGAGAGAGCAAACCCATCGGGCCGTCTTCAGGTTCATTCCCCGC CATCCGGACGAGCTGGAGCTGGATGTGGATGACCCGGTGCTGGTGGAGGCTGAGGAGGAT GACTTCTGGTTCCGAGGCTTCAACATGCGCACAGGGGAGCGGGGTGTCTTCCCTGCCTTC TACGCCCACGCGGTGCCCGGCCCGGCCAAGGACCTGCTGGGGAGCAAGCGGGGTCCCTGC TGGGTGGAGCGCTTCGACGTCCAGTTCCTGGGCTCCGTGGAGGTACCCTGTCACCAGGGC AACGGTATCCTCTGTGCAGCCATGCAGAAGATGGCCACTGCCCGAAAACTGACTGTCCAC CTGCGTCCTCCTGCCTCCTGTGACCTTGAGATTTCTCTTCGGGGGGTCAAGCTGAGTCTA AGTGGAGGACCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 1-332, gnl|bosTau2|chr5 (75670209-75669882) | |
| 1-332, gnl|Hg17|chr22 (49333304-49333637) | |
| 1-332, gnl|Mm7|chr15 (89540916-89541249) | |
| 393-581, gnl|bosTau2|chr5 (75669388-75669199) | |
| 393-581, gnl|Hg17|chr22 (49334125-49334307) | |
| 393-581, gnl|Mm7|chr15 (89541778-89541967) | |
| 405-554, gnl|bosTau2|chr15 (47725079-47725228) | |
| 405-554, gnl|canFam2|chr18 (46552895-46553062) | |
| 405-554, gnl|danRer3|chr1 (40664111-40664271) | |
| 405-554, gnl|dasNov1|scaffold_109456 (1287-1452) | |
| 405-554, gnl|echTel1|scaffold_311183 (43567-43401) | |
| 405-554, gnl|fr1|chrUn (162596098-162595938) | |
| 405-554, gnl|galGal2|chr5 (21214604-21214771) | |
| 405-554, gnl|Hg17|chr11 (45882113-45882262) | |
| 405-554, gnl|hg17|chr17 (41034492-41034659) | |
| 405-554, gnl|loxAfr1|scaffold_39929 (23224-23390) | |
| 405-554, gnl|mm7|chr2 (92236515-92236682) | |
| 405-554, gnl|Mm7|chr2 (92236686-92236537) | |
| 405-554, gnl|monDom2|scaffold_33 (11903872-11903705) | |
| 405-554, gnl|panTro1|chr19 (44386087-44386254) | |
| 405-554, gnl|rheMac2|chr14 (26229780-26229947) | |
| 405-554, gnl|rn3|chr3 (76680006-76680173) | |
| 405-554, gnl|tetNig1|chr5 (11691718-11691558) | |
| 405-554, gnl|xenTro1|scaffold_76 (1593522-1593355) | |
| 689-791, gnl|bosTau2|chr5 (75668258-75668156) | |
| 689-791, gnl|canFam2|chr10 (19694233-19694140) | |
| 689-791, gnl|danRer3|chr1 (40661605-40661520) | |
| 689-791, gnl|dasNov1|scaffold_109456 (1170-1090) | |
| 689-791, gnl|echTel1|scaffold_212514 (7501-7594) | |
| 689-791, gnl|fr1|chrUn (257437009-257437097) | |
| 689-791, gnl|hg17|chr22 (49335220-49335313) | |
| 689-791, gnl|Hg17|chr22 (49335228-49335333) | |
| 689-791, gnl|loxAfr1|scaffold_42083 (4193-4100) | |
| 689-791, gnl|mm7|chr15 (89543244-89543337) | |
| 689-791, gnl|Mm7|chr15 (89543252-89543357) | |
| 689-791, gnl|monDom2|scaffold_119 (1159183-1159275) | |
| 689-791, gnl|panTro1|chr23 (49828237-49828330) | |
| 689-791, gnl|rheMac2|chr10 (94635992-94636081) | |
| 689-791, gnl|rn3|chr7 (127813282-127813375) | |
| 689-791, gnl|tetNig1|chr13 (4083383-4083298) | |
| 689-791, gnl|xenTro1|scaffold_1053 (42396-42489) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-332, gnl|bosTau2|chr5 (75670209-75669882) | |
| 1-332, gnl|Hg17|chr22 (49333304-49333637) | |
| 1-332, gnl|Mm7|chr15 (89540916-89541249) | |
| 393-581, gnl|bosTau2|chr5 (75669388-75669199) | |
| 393-581, gnl|Hg17|chr22 (49334125-49334307) | |
| 393-581, gnl|Mm7|chr15 (89541778-89541967) | |
| 405-554, gnl|bosTau2|chr15 (47725079-47725228) | |
| 405-554, gnl|canFam2|chr18 (46552895-46553062) | |
| 405-554, gnl|danRer3|chr1 (40664111-40664271) | |
| 405-554, gnl|dasNov1|scaffold_109456 (1287-1452) | |
| 405-554, gnl|echTel1|scaffold_311183 (43567-43401) | |
| 405-554, gnl|fr1|chrUn (162596098-162595938) | |
| 405-554, gnl|galGal2|chr5 (21214604-21214771) | |
| 405-554, gnl|Hg17|chr11 (45882113-45882262) | |
| 405-554, gnl|hg17|chr17 (41034492-41034659) | |
| 405-554, gnl|loxAfr1|scaffold_39929 (23224-23390) | |
| 405-554, gnl|mm7|chr2 (92236515-92236682) | |
| 405-554, gnl|Mm7|chr2 (92236686-92236537) | |
| 405-554, gnl|monDom2|scaffold_33 (11903872-11903705) | |
| 405-554, gnl|panTro1|chr19 (44386087-44386254) | |
| 405-554, gnl|rheMac2|chr14 (26229780-26229947) | |
| 405-554, gnl|rn3|chr3 (76680006-76680173) | |
| 405-554, gnl|tetNig1|chr5 (11691718-11691558) | |
| 405-554, gnl|xenTro1|scaffold_76 (1593522-1593355) | |
| 689-791, gnl|bosTau2|chr5 (75668258-75668156) | |
| 689-791, gnl|canFam2|chr10 (19694233-19694140) | |
| 689-791, gnl|danRer3|chr1 (40661605-40661520) | |
| 689-791, gnl|dasNov1|scaffold_109456 (1170-1090) | |
| 689-791, gnl|echTel1|scaffold_212514 (7501-7594) | |
| 689-791, gnl|fr1|chrUn (257437009-257437097) | |
| 689-791, gnl|hg17|chr22 (49335220-49335313) | |
| 689-791, gnl|Hg17|chr22 (49335228-49335333) | |
| 689-791, gnl|loxAfr1|scaffold_42083 (4193-4100) | |
| 689-791, gnl|mm7|chr15 (89543244-89543337) | |
| 689-791, gnl|Mm7|chr15 (89543252-89543357) | |
| 689-791, gnl|monDom2|scaffold_119 (1159183-1159275) | |
| 689-791, gnl|panTro1|chr23 (49828237-49828330) | |
| 689-791, gnl|rheMac2|chr10 (94635992-94636081) | |
| 689-791, gnl|rn3|chr7 (127813282-127813375) | |
| 689-791, gnl|tetNig1|chr13 (4083383-4083298) | |
| 689-791, gnl|xenTro1|scaffold_1053 (42396-42489) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ebs (0.118301) | |
| ecc (0.115035) |