Non-Coding RNA Search

Ss1.1-rebs26c_i19.5

Sequence:


               
               CATCTTCAGTCATCCATATCACAAAAGAATTTTCCTTTGTTTGGAGTGTTGGGAGGTGCT
CTGAGGATGCAACTTTTTTGGGGGGGTCTTGGTTTATGCCCCTTGCGCTTGGCCCCCTTA
GCCCCTTGCCCTGCCCCCATCCCAGCTCAGTGGTGAAAGGGGGCTCTGATCTTTTCTAAA
GTGGGTGGTTTGTCTTTTGGTCTCTCCCTTTGAGATATGCGTGTGTGTTTGCGTGTGCCG
CGTGCGTGGCATGCGTGTGAGTGTGTGCGCGTGAACAGCTTTGGGTTCCGTTGGTTTCGC
TGTCAGCTGCAGTGTTCTGTGGGTCTGTGGTATCTGACACTGTGGATATTAATGTACTTC
TTGGACATTTTAATAAAATTTTTTAACAGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCTTCAGTCATCCATATCACAAAAGAATTTTCCTTTGTTTGGAGTGTTGGGAGGTGCT
CTGAGGATGCAACTTTTTTGGGGGGGTCTTGGTTTATGCCCCTTGCGCTTGGCCCCCTTA
GCCCCTTGCCCTGCCCCCATCCCAGCTCAGTGGTGAAAGGGGGCTCTGATCTTTTCTAAA
GTGGGTGGTTTGTCTTTTGGTCTCTCCCTTTGAGATATGCGTGTGTGTTTGCGTGTGCCG
CGTGCGTGGCATGCGTGTGAGTGTGTGCGCGTGAACAGCTTTGGGTTCCGTTGGTTTCGC
TGTCAGCTGCAGTGTTCTGTGGGTCTGTGGTATCTGACACTGTGGATATTAATGTACTTC
TTGGACATTTTAATAAAATTTTTTAACAGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-394, gnl|bosTau2|chr7 (2670569-2670958)
               

               
               1-394, gnl|Hg17|chr19 (19223658-19224042)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-394, gnl|bosTau2|chr7 (2670569-2670958)
               

               
               1-394, gnl|Hg17|chr19 (19223658-19224042)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               fce (0.814775)
               

               
               fhi (0.678311)
               

               
               fbs (0.526039)
               

               
               ece (0.45861)
               

               
               ecc (0.23007)
               

               
               fcc (0.197785)
               

               
               hyp (0.142837)
               

               
               ebs (0.118301)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.814775)
               

               
               fhi (0.678311)
               

               
               fbs (0.526039)
               

               
               ece (0.45861)
               

               
               ecc (0.23007)
               

               
               fcc (0.197785)
               

               
               hyp (0.142837)
               

               
               ebs (0.118301)

	1-394, gnl\|bosTau2\|chr7 (2670569-2670958)
	1-394, gnl\|Hg17\|chr19 (19223658-19224042)

	fce (0.814775)
	fhi (0.678311)
	fbs (0.526039)
	ece (0.45861)
	ecc (0.23007)
	fcc (0.197785)
	hyp (0.142837)
	ebs (0.118301)