Non-Coding RNA Search

Ss1.1-rebs26c_o14.5

Sequence:


               
               TAAAATTATGTACACTTTGAAGGTACTTTTCCTTCCCACTCATCATGTGGTTATAATAAA
TGAATGGAAGAAATATTTCTAGTGGAAGGTTCTGTTGCTTGCCAGACTTTTTAAGGAGAG
CTCCACATCATACAAGTCCTGCCAGGAAGAACAGATGCCCAGAAGGAGGTGTGAACTTTT
GAGTCAATCAATATGCAAATCATTTGCTGGAAAAAGCTACACTTGTTTCTTGAAGGAAAA
CAGTCAATTTCAGGTATTTCCCACAGTTTCATTAACAAGAGCTTAACACAAATGGCTTGA
TTGATACATTTATTAATGTCTTTGAAAAAATCTTCATAGAAAAACTATGGCCTGGTTTAT
TAGCTCTCAGCAGCCCGTTCCTGAGCTCGAAGGAAGCTTGCTTTCTTCTGAGCAACCCGA
TCTTTCTTCTGGGCAAGTGACATTTTGGGACGATTCCACCTACAAAAAGGGAGAAAAAAA
GGGAATGTAATTTTTAAAAACCATTATCTAAAGAGAACAGAGAATATTTAACTGCGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAATTATGTACACTTTGAAGGTACTTTTCCTTCCCACTCATCATGTGGTTATAATAAA
TGAATGGAAGAAATATTTCTAGTGGAAGGTTCTGTTGCTTGCCAGACTTTTTAAGGAGAG
CTCCACATCATACAAGTCCTGCCAGGAAGAACAGATGCCCAGAAGGAGGTGTGAACTTTT
GAGTCAATCAATATGCAAATCATTTGCTGGAAAAAGCTACACTTGTTTCTTGAAGGAAAA
CAGTCAATTTCAGGTATTTCCCACAGTTTCATTAACAAGAGCTTAACACAAATGGCTTGA
TTGATACATTTATTAATGTCTTTGAAAAAATCTTCATAGAAAAACTATGGCCTGGTTTAT
TAGCTCTCAGCAGCCCGTTCCTGAGCTCGAAGGAAGCTTGCTTTCTTCTGAGCAACCCGA
TCTTTCTTCTGGGCAAGTGACATTTTGGGACGATTCCACCTACAAAAAGGGAGAAAAAAA
GGGAATGTAATTTTTAAAAACCATTATCTAAAGAGAACAGAGAATATTTAACTGCGAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|2258408|gb|AAB63282.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|2258408|gb|AAB63282.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               295-450, gnl|bosTau2|chr10 (24018304-24018458)
               

               
               295-450, gnl|Hg17|chr22 (41496864-41496997)
               

               
               295-450, gnl|Mm7|chr7 (110621282-110621425)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               295-450, gnl|bosTau2|chr10 (24018304-24018458)
               

               
               295-450, gnl|Hg17|chr22 (41496864-41496997)
               

               
               295-450, gnl|Mm7|chr7 (110621282-110621425)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               vin (0.332557)
               

               
               fcc (0.197785)
               

               
               fbs (0.175346)
               

               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

Expressed library(ies): 8 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               vin (0.332557)
               

               
               fcc (0.197785)
               

               
               fbs (0.175346)
               

               
               rec (0.17307)
               

               
               ski (0.146735)
               

               
               thg (0.126791)
               

               
               ebs (0.118301)
               

               
               spc (0.113366)

	295-450, gnl\|bosTau2\|chr10 (24018304-24018458)
	295-450, gnl\|Hg17\|chr22 (41496864-41496997)
	295-450, gnl\|Mm7\|chr7 (110621282-110621425)

	vin (0.332557)
	fcc (0.197785)
	fbs (0.175346)
	rec (0.17307)
	ski (0.146735)
	thg (0.126791)
	ebs (0.118301)
	spc (0.113366)