Non-Coding RNA Search

Ss1.1-rebs26c_p6.5

Sequence:


               
               GGTGCCATGGCTGCGAGGATGGCGGCTTTTGTGCTGCTGCTAGGGCTCGCGGAACGCGGG
CCCGCGCGCTCAGGTGCCGCCAAGATGAAGGTGGTGGAGGAGCCCAACACGTTCGGCCTC
AACAACCCGTTCATGCCCCAGACCAGTCGCCTCCAGCCCAAGAGGGATCCTTCGCCCGTG
TCTGGGCCCGGGCATCTCTCCAGACTCTCCGGCAAGTGCTTCAGCCTGGTGGAGGCCACG
TACAAGTATGAGTTCTGCCCATTCCACAACGTGACCCAGCATGAGCAGACCTTCCGCTGG
AACGCCTACAGCGGGATCCTCGGCATCTGGCACGAGTGGGAAATAGCCAACAACACCTTC
AGGGGCATGTGGATGAGAGACGGCGACTCCTGCCACTCCCAGAGCCGGCAGAGCAAGGTG
GAGCTTACCTGCGGCAAGAGCAACCGGTTGGCCCATGTGTCCGAGCCACACACCTGTGTC
TACGCGCTGACCTTTGAGACGCCCCTTGTGTGCCACCCCCACTCCTTGCTAGTGTACCCC
ACCCTGCCTGCGGCCCTGCAGCACAGGTGGGAGCAGGTGGAGCAGGATCTGGCGGACGGG
CTGATCACATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGCCATGGCTGCGAGGATGGCGGCTTTTGTGCTGCTGCTAGGGCTCGCGGAACGCGGG
CCCGCGCGCTCAGGTGCCGCCAAGATGAAGGTGGTGGAGGAGCCCAACACGTTCGGCCTC
AACAACCCGTTCATGCCCCAGACCAGTCGCCTCCAGCCCAAGAGGGATCCTTCGCCCGTG
TCTGGGCCCGGGCATCTCTCCAGACTCTCCGGCAAGTGCTTCAGCCTGGTGGAGGCCACG
TACAAGTATGAGTTCTGCCCATTCCACAACGTGACCCAGCATGAGCAGACCTTCCGCTGG
AACGCCTACAGCGGGATCCTCGGCATCTGGCACGAGTGGGAAATAGCCAACAACACCTTC
AGGGGCATGTGGATGAGAGACGGCGACTCCTGCCACTCCCAGAGCCGGCAGAGCAAGGTG
GAGCTTACCTGCGGCAAGAGCAACCGGTTGGCCCATGTGTCCGAGCCACACACCTGTGTC
TACGCGCTGACCTTTGAGACGCCCCTTGTGTGCCACCCCCACTCCTTGCTAGTGTACCCC
ACCCTGCCTGCGGCCCTGCAGCACAGGTGGGAGCAGGTGGAGCAGGATCTGGCGGACGGG
CTGATCACATCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q5UJ03_MOUSE

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q5UJ03_MOUSE

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               416-532, gnl|bosTau2|chr25 (702615-702499)
               

               
               416-532, gnl|Hg17|chr16 (1352206-1352322)
               

               
               416-532, gnl|Mm7|chr17 (23418552-23418436)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               416-532, gnl|bosTau2|chr25 (702615-702499)
               

               
               416-532, gnl|Hg17|chr16 (1352206-1352322)
               

               
               416-532, gnl|Mm7|chr17 (23418552-23418436)

Expressed library(ies): 7 entry(ies)

More info

Expressed library(ies): 7 entry(ies)

Help | Less info


               
               nep (0.36785)
               

               
               cty (0.20816)
               

               
               nlu (0.191681)
               

               
               ill (0.175593)
               

               
               cov (0.132153)
               

               
               eep (0.122564)
               

               
               ebs (0.118301)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nep (0.36785)
               

               
               cty (0.20816)
               

               
               nlu (0.191681)
               

               
               ill (0.175593)
               

               
               cov (0.132153)
               

               
               eep (0.122564)
               

               
               ebs (0.118301)

	416-532, gnl\|bosTau2\|chr25 (702615-702499)
	416-532, gnl\|Hg17\|chr16 (1352206-1352322)
	416-532, gnl\|Mm7\|chr17 (23418552-23418436)

	nep (0.36785)
	cty (0.20816)
	nlu (0.191681)
	ill (0.175593)
	cov (0.132153)
	eep (0.122564)
	ebs (0.118301)